LOCUS BC028234 1703 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens N-ethylmaleimide-sensitive factor attachment protein,
alpha, mRNA (cDNA clone MGC:40092 IMAGE:5245770), complete cds.
ACCESSION BC028234
VERSION BC028234.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1703)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1703)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1703
/db_xref="H-InvDB:HIT000040503"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40092 IMAGE:5245770"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1703
/gene="NAPA"
/gene_synonym="SNAPA"
/db_xref="GeneID:8775"
/db_xref="HGNC:HGNC:7641"
/db_xref="MIM:603215"
CDS 137..1024
/gene="NAPA"
/gene_synonym="SNAPA"
/codon_start=1
/product="N-ethylmaleimide-sensitive factor attachment
protein, alpha"
/protein_id="AAH28234.1"
/db_xref="GeneID:8775"
/db_xref="HGNC:HGNC:7641"
/db_xref="MIM:603215"
/translation="MDNSGKEAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEI
YARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAIN
CLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDIEKAIAHYEQSADYYKGEESNSS
ANKCLLKVAGYAALLEQYQKAIDIYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDM
LNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWL
TTMLLRIKKTIQGDEEDLR"
BASE COUNT 395 a 518 c 455 g 335 t
ORIGIN
1 ggccgcaagc gacgcgcgcc ggtgcgacgt caacgcagcc gggcgagttt taccgatctg
61 tgttccgcgg cccggccgcg gctgagtctt cccagggtca gggtcaggcg ctttgctgag
121 tccctttgtg gccgccatgg acaattccgg gaaggaagcg gaggcgatgg cgctgttggc
181 cgaggcggag cgcaaagtga agaactcgca gtccttcttc tctggcctct ttggaggctc
241 atccaaaata gaggaagcat gcgaaatcta cgccagagca gcaaacatgt tcaaaatggc
301 caaaaactgg agtgctgctg gaaacgcgtt ctgccaggct gcacagctgc acctgcagct
361 ccagagcaag cacgacgcag ccacctgctt tgtggacgct ggcaacgcat tcaagaaagc
421 cgacccccaa gaggccatta actgtttgat gcgagcaatc gagatctaca cagacatggg
481 ccgattcacg attgcggcca agcaccacat ctccattgct gagatctatg agacagagtt
541 ggtggacatc gagaaggcca ttgcccacta cgagcagtct gcagactact acaaaggcga
601 ggagtccaac agctcagcca acaagtgtct gctgaaggtg gctggttacg ctgcgctgct
661 ggagcagtat cagaaggcca ttgacatcta cgaacaggtg gggaccaatg ccatggacag
721 ccccctcctc aagtacagcg ccaaagacta cttcttcaag gcggccctct gccacttctg
781 catcgacatg ctcaacgcca agctggctgt ccaaaagtat gaggagctgt tcccagcttt
841 ctctgattcc cgggaatgca agttgatgaa aaaattgcta gaggcccacg aggagcagaa
901 tgtggacagc tacaccgagt cggtgaagga atacgactcc atctcccggc tggaccagtg
961 gctcaccacc atgctgctgc gcatcaagaa gaccatccag ggcgatgagg aggacctgcg
1021 ctaagcccca cccagccccc cagtgcccgt cttcctgtcc catctgctca gagagaggtg
1081 gggccgagac ttgctggaga gcttccctcc tttcccatct ggggagtccc gcgggccaca
1141 gtgggcaggt ggcaccgggg gtcagcatgc aggggcgcca gaggcccagg ctgctggccg
1201 gacagtcacc ctctgttctc gctacatccc ttgccccctg tccatttatt taagccccca
1261 taggtgccct tcacccccaa aaccagctgt acagaatctt tgatacagac ctatttgcta
1321 ggggtgctgc cggggatttg gggtcagcat ctggccccct atctcctgac cagctgagtc
1381 atgaggccgg tttctctctc tctcccactt ttgtccccca gccaagctct aaagcacatg
1441 tagccgctga gacctgctgt ttctgctggg ggcaggctcc tcttccccca gccccgggag
1501 cctcccccag cttcctgcag ccccgacctc tcaggttaga ccctgggccc tggagcttag
1561 gggattctcc ccaccccagc cccacacctg ctccttccct aatgctttga ggttttcttg
1621 gttggaagct gcagctggcc caagaaagaa aataaaaaac aacacttttg catgaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaa
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