LOCUS BC028199 1923 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens CD300 molecule-like family member f, mRNA (cDNA clone
MGC:40116 IMAGE:5207520), complete cds.
ACCESSION BC028199
VERSION BC028199.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1923)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1923)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: f Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38455397.
FEATURES Location/Qualifiers
source 1..1923
/db_xref="H-InvDB:HIT000040482"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40116 IMAGE:5207520"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1923
/gene="CD300LF"
/gene_synonym="CD300f"
/gene_synonym="CLM1"
/gene_synonym="IgSF13"
/gene_synonym="IREM1"
/gene_synonym="NKIR"
/db_xref="GeneID:146722"
/db_xref="HGNC:HGNC:29883"
/db_xref="MIM:609807"
CDS 278..862
/gene="CD300LF"
/gene_synonym="CD300f"
/gene_synonym="CLM1"
/gene_synonym="IgSF13"
/gene_synonym="IREM1"
/gene_synonym="NKIR"
/codon_start=1
/product="CD300LF protein"
/protein_id="AAH28199.1"
/db_xref="GeneID:146722"
/db_xref="HGNC:HGNC:29883"
/db_xref="MIM:609807"
/translation="MWLPQLDLMRVISAKSQGYSIATQITGPTTVNGLERGSLTVQCV
YRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLM
KTDADTYWCGIEKTGNDLGVTVQVTIDPAPVTQEETSSSPTLTGHHLDNSSRDVPRAG
TAAPGGRPLLCRPDPAAGRNLPAKGYHEAFLCPG"
BASE COUNT 555 a 469 c 491 g 408 t
ORIGIN
1 tgaaggagga agttcaaggg cgagagtgag taccagcaga aggctgggag tctgtagttt
61 gttcctgctg ccaggctcca ctgaggggaa cggggacctg tctgaagaga agatgcccct
121 gctgacactc tacctgctcc tcttctggct ctcagcacat ggagaccagt tgccgttgct
181 gttttgatca acttcaaagg cattcatcca gggtggttta ttccagaacc actagaaatc
241 attaggacca ccaggacagc ctctccacag ccatctgatg tggctgcctc agctcgacct
301 catgagggtc atcagtgcta agagtcaagg ctactccatt gccactcaaa tcaccggtcc
361 aacaacagtg aatggcttgg agcggggctc cttgaccgtg cagtgtgttt acagatcagg
421 ctgggagacc tacttgaagt ggtggtgtcg aggagctatt tggcgtgact gcaagatcct
481 tgttaaaacc agtgggtcag agcaggaggt gaagagggac cgggtgtcca tcaaggacaa
541 tcagaaaaac cgcacgttca ctgtgaccat ggaggatctc atgaaaactg atgctgacac
601 ttactggtgt ggaattgaga aaactggaaa tgaccttggg gtcacagttc aagtgaccat
661 tgacccagca ccagtcaccc aagaagaaac tagcagctcc ccaactctga ccggccacca
721 cttggacaac agcagccggg atgtccccag agcaggtact gcagcccctg gagggcgacc
781 tctgctatgc agacctgacc ctgcagctgg ccggaacctc cccgcgaaag gctaccacga
841 agctttcctc tgcccaggtt gaccaggtgg aagtggaata tgtcaccatg gcttccttgc
901 cgaaggagga catttcctat gcatctctga ccttgggtgc tgaggatcag gaaccgacct
961 actgcaacat gggccacctc agtagccacc tccccggcag gggccctgag gagcccacgg
1021 aatacagcac catcagcagg ccttagcctg cactccaggc tccttcttgg accccaggct
1081 gtgagcacac tcctgcctca tcgaccgtct gccccctgct cccctcatca ggaccaaccc
1141 ggggactggt gcctctgcct gatcagccag cattgcccct agctctgggt tgggcttggg
1201 gccaagtctc agggggcttc taggagttgg ggttttctaa acgtcccctc ctctcctaca
1261 tagttgagga gggggctagg gatatgctct ggggctttca tgggaatgat gaagatgata
1321 atgagaaaaa tgttatcatt attatcatga agtaccatta tcataataca atgaaccttt
1381 atttattgcc taccacatgt tatgggctga ataatggccc ccaaagatat ctgtgtccta
1441 atcctcagaa cttgtgactg ttaccttctg tggcagaaag ggacagtgca gatgtatgta
1501 agttaaggac tttgagatag agaggttatt cttgctgatt caggtgggcc caaaatatca
1561 ccacaagggt cctcataaga aagaggccag aaggtcaaag aggtagagac aaagtgatga
1621 tggaagtgga cgtgggtgtg acgtgagcag gggccatgaa tgccgcagcc ttcagatgcc
1681 agaaagggaa aggaatggat tcccctgcct ggagcctcca aaagaaacca gccctgccca
1741 cgccttgact tgagcccatt gaaactgatc ttgagctcct ggcctccaga attgcaggag
1801 aataaatttg tgttgttttt aatgaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaa
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