LOCUS BC028189 2826 bp mRNA linear HTC 08-DEC-2006
DEFINITION Homo sapiens ankyrin repeat domain 5, mRNA (cDNA clone
IMAGE:5172312), with apparent retained intron.
ACCESSION BC028189
VERSION BC028189.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2826)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2826)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: d Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38569427
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2826
/db_xref="H-InvDB:HIT000091532"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5172312"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 885 a 578 c 680 g 683 t
ORIGIN
1 cccagccctg ctgtcccgcg cgccagctca ccagccctac ccaagggaca tcattcacgc
61 ctgggcgcct ccgccgggct ccgggagccc aaggtcgcgg ctgggccagc gctgagcgtc
121 agaggacgag agcaggggcc tccccggtcg ccccagcagg cccaggcaca taggtgccca
181 gagatccctg gcttctgatc gcccggaaga ctaagagctt tagttttggt ccagaaagca
241 ttttcaagga gctggtcaag catggcttta gcagataaga gacttgagaa cttacagatc
301 tacaaagttc ttcaatgtgt gcggaacaaa gacaagaagc agatagagaa gctgaccaag
361 cttggatacc ctgaactaat caattataca gaacccatta atggacttag tgctttgcac
421 ttagcctcag tttccaatga tattgatatg gtcagctttc tccttgacct tggtgctcac
481 cctgatgtgc aagaccgaat gggctgtact cccacaatga gggctgcaga actgggccat
541 gaattgtcaa tggaaatatt agcaaaggca aaggctgata tgactatagt tgataatgaa
601 ggaaaaggca tgtgtactca gtcctcaatg ccgtatgcca gttctatgat aaggtgcttt
661 gttttactgc attttaccga ctaagcggca ttatcgctgt gctctgatcg cccttgaaca
721 tggtgcagat gtcaacaatt ctacctatga aggaaagcca atattcctta gagcttgtga
781 agatgcacat gatgttaaag atgtgtgcct gacatttttg gaaaaaggag ccaatcctaa
841 tgcaatcaac tcatccacag gccgcacagc tttaatggaa gcgtcaagag aaggggtagt
901 ggaaatagtt cgaggcatat tggaaagagg aggtgaagtg aatgcatttg acaacgacag
961 gcatcacgct gctcattttg ctgctaaagg aggctttttc gatatattga agcttctttt
1021 tgcctacaat ggagacgtgg ggctgatttc gataaatggg aacacaccac ttcattatgc
1081 tgccatgggt ggttttgcag actgctgtaa atatatagct cagcgaggat gtgacctgaa
1141 atggaagaat ttagatcata aaacgcccag ggctgtggct aaggaaggcg gcttcaaagc
1201 agcaagcaaa gaaatacgcc gagcagagag aatcgctaat aaactagcca ggccaggagc
1261 caaaaatcca aatccactgt gggcccttag actgcacgat tggtccgtag aacgtgaggc
1321 tttcctccgg gaagcctttg cggttttaga caggggtgat ggaagcatca gcaagaacga
1381 cttcgtgatg gtgttggagg aaaggcagga ttatgcaagc tcagaacagc tggctgccat
1441 cgctcacctt catgagaaaa cccggggagg aggggtcaat attaatgaat tctttaaagg
1501 aaccagatat ttaaacaagt cttttgtctt aggatcgtat ggacctaaga aaaaggaaaa
1561 agggatgggc aaaaaaggaa agaaagggaa atttgtctta ccccttccaa tctgtgtcat
1621 tcctgagtac gcgtttccac gccggcagga tggtgggcca ccgtattaca tgattgagac
1681 ctacaagaat gtcactgata gcagccggtt taatagagat catcccccag aacatcccat
1741 tcaggatgac tctgtttggt acattgatga ttcagagaag gtattttcaa acattaatat
1801 tatcaccaaa gcaggggatc tggcttctct gaaaaaggcc tttgaatcag gaatacctgt
1861 ggatatgaag gataattatt acaaaactcc gctaatgacg gcgtgtgcaa gtggaaacat
1921 agatgtggtc aagtttcttc ttgaaaaagg agctaacgtt aatgcaacag ataactttct
1981 gtggactcca cttcattttg catgccatgc aggccaacaa gacattgttg agcttcttgt
2041 tgaatctgga gctttaatag atgcagcttc aatcaacaac tcaactcctt taaatagagc
2101 cattgaaagc tgcagactgg atacagtaaa atacctactt gatattggtg ctaaattcca
2161 gctggaaaat agaaaagggc atagtgccat ggacgttgca aaggcatatg ctgattatag
2221 aataattgat ctgattaaag aaaagctaga taacttgccg aaaccagcag aaaatcaaaa
2281 actaaaaggc aagacacctc ctatactgaa gactgaaggc cctgaaatta agaaagaaga
2341 ggaactgctg tcatcaattt atggtgtacc aaccacatca gagggaaaga aagtacagaa
2401 gggtaatgtg gttcatctga attcattgat taccagtggt tatactaaga aagtggatat
2461 cacatttatt ccacggagga tttggagtcc tgaagccaca acagcagagc tgatcaggaa
2521 gagggaacta cggcgagaga ggtttacaca tgaggtggac ttcgacgatt ttatgatgcc
2581 ttttcagaag aacatcacag agaaagctcg agcactggaa gctgccttga agacctaagt
2641 catagcagtt atttcttggg gtaaatgctt tgaggcccag ggaccaatct ttggagaaag
2701 tagatatttc catcaaagcc aaagcaatcc atacaccaag aacttgttac caagaatttc
2761 tttttgcttt aacaactata aatattctta gctgtctaga gaaaaaaaaa aaaaaaaaaa
2821 aaaaaa
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