LOCUS BC028182 4513 bp mRNA linear HUM 14-SEP-2006
DEFINITION Homo sapiens non-SMC condensin I complex, subunit D2, mRNA (cDNA
clone MGC:39941 IMAGE:5395775), complete cds.
ACCESSION BC028182
VERSION BC028182.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4513)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4513)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281520.
FEATURES Location/Qualifiers
source 1..4513
/db_xref="H-InvDB:HIT000040480"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39941 IMAGE:5395775"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4513
/gene="NCAPD2"
/gene_synonym="CAP-D2"
/gene_synonym="CNAP1"
/gene_synonym="hCAP-D2"
/gene_synonym="KIAA0159"
/db_xref="GeneID:9918"
/db_xref="HGNC:HGNC:24305"
CDS 59..4264
/gene="NCAPD2"
/gene_synonym="CAP-D2"
/gene_synonym="CNAP1"
/gene_synonym="hCAP-D2"
/gene_synonym="KIAA0159"
/codon_start=1
/product="non-SMC condensin I complex, subunit D2"
/protein_id="AAH28182.1"
/db_xref="GeneID:9918"
/db_xref="HGNC:HGNC:24305"
/translation="MAPQMYEFHLPLSPEELLKSGGVNQYVVQEVLSIKHLPPQLRAF
QAAFRAQGPLAMLQHFDTIYSILHHFRSIDPGLKEDTLEFLIKVVSRHSQELPAILDD
TTLSGSDRNAHLNALKMNCYALIRLLESFETMASQTNLVDLDLGGKGKKARTKAAHGF
DWEEERQPILQLLTQLLQLDIRHLWNHSIIEEEFVSLVTGCCYRLLENPTINHQKNRP
TREAITHLLGVALTRYNHMLSATVKIIQMLQHFEHLAPVLVAAVSLWATDYGMKSIVG
EIVREIGQKCPQELSRDPSGTKGFAAFLTELAERVPAILMSSMCILLDHLDGENYMMR
NAVLAAMAEMVLQVLSGDQLEAAARDTRDQFLDTLQAHGHDVNSFVRSRVLQLFTRIV
QQKALPLTRFQAVVALAVGRLADKSVLVCKNAIQLLASFLANNPFSCKLSDADLAGPL
QKETQKLQEMRAQRRTAAASAVLDPEEEWEAMLPELKSTLQQLLQLPQGEEEIPEQIA
NTETTEDVKGRIYQLLAKASYKKAIILTREATGHFQESEPFSHIDPEESEETRLLNIL
GLIFKGPAASTQEKNPRESTGNMVTGQTVCKNKPNMSDPEESRGNDELVKQEMLVQYL
QDAYSFSRKITEAIGIISKMMYENTTTVVQEVIEFFVMVFQFGVPQALFGVRRMLPLI
WSKEPGVREAVLNAYRQLYLNPKGDSARAKAQALIQNLSLLLVDASVGTIQCLEEILC
EFVQKDELKPAVTQLLWERATEKVACCPLERCSSVMLLGMMARGKPEIVGSNLDTLVS
IGLDEKFPQDYRLAQQVCHAIANISDRRKPSLGKRHPPFRLPQEHRLFERLRETVTKG
FVHPDPLWIPFKEVAVTLIYQLAEGPEVICAQILQGCAKQALEKLEEKRTSQEDPKES
PAMLPTFLLMNLLSLAGDVALQQLVHLEQAVSGELCRRRVLREEQEHKTKDPKEKNTS
SETTMEEELGLVGATADDTEAELIRGICEMELLDGKQTLAAFVPLLLKVCNNPGLYSN
PDLSAAASLALGKFCMISATFCDSQLRLLFTMLEKSPLPIVRSNLMVATGDLAIRFPN
LVDPWTPHLYARLRDPAQQVRKTAGLVMTHLILKDMVKVKGQVSEMAVLLIDPEPQIA
ALAKNFFNELSHKGNAIYNLLPDIISRLSDPELGVEEEPFHTIMKQLLSYITKDKQTE
SLVEKLCQRFRTSRTERQQRDLAYCVSQLPLTERGLRKMLDNFDCFGDKLSDESIFSA
FLSVVGKLRRGAKPEGKAIIDEFEQKLRACHTRGLDGIKELEIGQAGSQRAPSAKKPS
SGSRYQPLASTASDNDFVTPEPRRTTRRHPNTQQRASKKKPKVVFSSDESSEEDLSAE
MTEDETPKKTTPILRASARRHRS"
BASE COUNT 1165 a 1178 c 1178 g 992 t
ORIGIN
1 ccacgcgtcc gcagagccgc gggtgagatc cccagccctg tgagcctgta ggagtagaat
61 ggctccccaa atgtatgagt tccatctgcc attatcccca gaggagttgt tgaaaagtgg
121 aggggtgaat cagtatgttg tgcaagaggt actgtccatc aaacatcttc caccacagct
181 tagagctttt caggctgcct ttcgagctca ggggcccctg gctatgctgc agcactttga
241 tactatctac agcattttgc atcactttcg aagtatagat cctggcctca aagaagatac
301 tctggaattc ctgataaaag tggtatcccg ccactcccag gagcttccag ctatcctgga
361 tgatacaact ttgagtggat cagatagaaa cgcccatcta aatgccctca aaatgaactg
421 ttatgctctg atacgtctcc tggaatcctt tgagaccatg gccagccaga caaaccttgt
481 ggacctggac cttggtggga agggtaagaa agctcggacc aaggcagccc atggctttga
541 ctgggaagaa gagaggcaac caattcttca gcttttaaca cagctacttc agttggacat
601 ccgtcacctg tggaaccact caataattga agaagaattt gtcagtttgg ttactggctg
661 ttgctaccgc cttctggaga atcccaccat taatcaccag aagaaccgcc ccactcggga
721 agccataaca cacctgcttg gtgtagcctt gacccgttat aaccatatgc tcagtgctac
781 agtgaagatc atccagatgc tgcagcactt tgaacacctg gcacctgtac tggttgcagc
841 cgtgagtcta tgggcaactg actatggaat gaagagcata gtgggagaga ttgtaagaga
901 gattggacaa aagtgtcccc aagagctgag tcgagaccct tcagggacaa agggctttgc
961 agcattcctg acagaactag cagaacgtgt cccagctatc ctgatgtcca gcatgtgcat
1021 tttgctagat cacctggatg gagaaaatta catgatgcgt aatgctgtgc tggcagccat
1081 ggcggagatg gtgctgcagg ttctcagtgg cgatcaactg gaagcagcag cccgagacac
1141 cagagaccag ttcttggata ctttacaagc ccatggccat gatgtcaact cctttgtgcg
1201 gagccgtgtt ttgcagctct tcacccgaat tgtccagcag aaggctctcc ccctgacacg
1261 tttccaggca gtggtggctt tagctgtggg acgtctggca gacaagtcag tgctagtatg
1321 taaaaatgcc atccagctgc tggccagttt tctagccaat aatcctttct cctgcaagct
1381 tagtgatgct gaccttgccg gaccactgca gaaggagacc cagaaattac aagagatgag
1441 ggcccagagg cgaactgcag cagcttctgc agtgctggac ccagaggagg agtgggaagc
1501 catgctgcca gagttgaagt ctaccctgca gcagcttcta cagcttcccc agggagagga
1561 ggagattcct gagcaaattg ccaatacaga gacaactgaa gatgtgaaag gacgcatcta
1621 tcaactgctt gccaaagcta gttacaaaaa ggccatcatt ctcactcgag aagccacagg
1681 ccacttccag gagtccgaac ccttcagtca tatagaccca gaggagtcag aggagaccag
1741 gctcttgaat atcttaggac ttatcttcaa aggcccagca gcttccacac aagaaaagaa
1801 tccccgggag tctacaggaa acatggtcac aggacagact gtctgtaaaa ataaacccaa
1861 tatgtcggat cctgaggaat ccaggggaaa tgatgaacta gtgaagcagg agatgctggt
1921 acagtatctg caggatgcct acagcttctc ccggaagatt acagaggcca ttggcataat
1981 cagcaagatg atgtatgaaa acacaactac agtggtgcag gaggtgattg aattctttgt
2041 gatggtcttc caatttgggg taccccaggc cctgtttggg gtgcgccgta tgctgcctct
2101 catctggtct aaggagcctg gtgtccggga agccgtgctt aatgcctacc gccaactcta
2161 cctcaacccc aaaggggact ctgccagagc caaggcccag gctttgattc agaatctctc
2221 tctgctgcta gtggatgcct cggttgggac cattcagtgt cttgaggaaa ttctctgtga
2281 gtttgtgcag aaggatgagt tgaaaccagc agtgacccag ctgctgtggg agcgggccac
2341 cgagaaggtc gcctgctgtc ctctggagcg ctgttcctct gtcatgcttc ttggcatgat
2401 ggcacgagga aagccagaaa ttgtgggaag caatttagac acactggtga gcatagggct
2461 ggatgagaag tttccacagg actacaggct ggcccagcag gtgtgccatg ccattgccaa
2521 catctcggac aggagaaagc cttctctggg caaacgtcac ccccccttcc ggctgcctca
2581 ggaacacagg ttgtttgagc gactgcggga gacagtcaca aaaggctttg tccacccaga
2641 cccactctgg atcccattca aagaggtggc agtgaccctc atttaccaac tggcagaggg
2701 ccccgaagtg atctgtgccc agatattgca gggctgtgca aaacaggccc tggagaagct
2761 agaagagaag agaaccagtc aggaggaccc gaaggagtcc cccgcaatgc tccccacttt
2821 cctgttgatg aacctgctgt ccctggctgg ggatgtggct ctgcagcagc tggtccactt
2881 ggagcaggca gtgagtggag agctctgccg gcgccgagtt ctccgggaag aacaggagca
2941 caagaccaaa gatcccaagg agaagaatac gagctctgag accaccatgg aggaggagct
3001 ggggctggtt ggggcaacag cagatgacac agaggcagaa ctaatccgtg gcatctgcga
3061 gatggaactg ttggatggca aacagacact ggctgccttt gttccactct tgcttaaagt
3121 ctgtaacaac ccaggcctct atagcaaccc agacctctct gcagctgctt cacttgccct
3181 tggcaagttc tgcatgatca gtgccacttt ctgcgactcc cagcttcgtc ttctgttcac
3241 catgctggaa aagtctccac ttcccattgt ccggtctaac ctcatggttg ccactgggga
3301 tctggccatc cgctttccca atctggtgga cccctggact cctcatctgt atgctcgcct
3361 ccgggaccct gctcagcaag tgcggaaaac agcggggctg gtgatgaccc acctgatcct
3421 caaggacatg gtgaaggtga aggggcaggt cagcgagatg gcggtgctgc tcatcgaccc
3481 cgagcctcag attgctgccc tggccaagaa cttcttcaat gagctctccc acaagggcaa
3541 cgcaatctat aatctccttc cagatatcat cagccgcctg tcagaccccg agctgggggt
3601 ggaggaagag cctttccaca ccatcatgaa acagctcctc tcctacatca ccaaggacaa
3661 gcagacagag agcctggtgg aaaagctgtg tcagcggttc cgcacatccc gaactgagcg
3721 gcagcagcga gacctggcct actgtgtgtc acagctgccc ctcacagagc gaggcctccg
3781 taagatgctt gacaattttg actgttttgg agacaaactg tcagatgagt ccatcttcag
3841 tgcttttttg tcagttgtgg gcaagctgcg acgtggggcc aagcctgagg gcaaggctat
3901 aatagatgaa tttgagcaga agcttcgggc ctgtcatacc agaggtttgg atggaatcaa
3961 ggagcttgag attggccaag caggtagcca gagagcgcca tcagccaaga aaccatccag
4021 tggttctagg taccagcctc tggcttctac agcctcagac aatgactttg tcacaccaga
4081 gccccgccgt actacccgtc ggcatccaaa cacccagcag cgagcttcca aaaagaaacc
4141 caaagttgtc ttctcaagtg atgagtccag tgaggaagat ctttcagcag agatgacaga
4201 agacgagaca cccaagaaaa caactcccat tctcagagca tcggctcgca ggcacagatc
4261 ctaggaagtc tgttcctgtc ctccctgtgc agggtatcct gtagggtgac ctggaattcg
4321 aattctgttt cccttgtaaa atatttgtct gtctcttttt ttaaaaaaaa aaaaaaaagg
4381 ccgggcactg tggctcacgc ctgtaatccc agcactttgc gataccaagg cgggtggata
4441 acctgaggta gggagttcga gaccagcctg accaacatgg agaaacccca tctctactaa
4501 aaaaaaaaaa aaa
//