LOCUS BC028174 1435 bp mRNA linear HTC 22-AUG-2008
DEFINITION Homo sapiens chromosome 17 open reading frame 100, mRNA (cDNA clone
IMAGE:5415767), with apparent retained intron.
ACCESSION BC028174
VERSION BC028174.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1435)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1435)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1435
/db_xref="H-InvDB:HIT000091523"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5415767"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 372 a 404 c 351 g 308 t
ORIGIN
1 ccacgcgtcc gcttcgaagg accatggtgc ttccacgtca tcgtgttgtg gcgctcccgg
61 ctatggcagt accgtagttt tcctctcttc tgcctgcggt gaccattggg ctgtagggtg
121 ccccgaggcc tccctggccc cctcacgccg gcagaatggc ctcagcccga ggggccaagc
181 agtcttcgcc ccgggtgggg accacccgct acacagagac gtccacggtc cgcgtggaga
241 cctcgtccca ccgcgtggag acgtcgtccc ggcgggtgga gacctcccag cgccgcagcg
301 aggggccctc cctctccccc tcggggaagc ggctccctcg catcctcgag gcgtcctccc
361 ggcacgtgga atcctcctcg cagcgcacgg aaacgacctc ccgccacgtc agagcctcgt
421 ccctgagggt ggagacgtct ctgcactgcg cggagagccc gaccccgcgg gccaagccgg
481 ccgcccgcca gaacgaaaaa acggcccgat gagatgctgc ttcccaaagg ccaccaaggg
541 gccagggccc tcagccagga cagaaaggcc tccagttgcc agccagccag ccagctgcca
601 ggtggaccaa tcattttcgg tttcatggaa acaaaccata aatcaatgta agaaacagcc
661 aagccgcagt ttctgaacac agccaacgtt tactgaccgt cctgcgtctt ggaccagcct
721 acttttgacc cagtgaacta ttttcacttg aagccagcac agaaggtttt caggcccagg
781 atgctgtcta aatcgggttg atggacaaag agaggctgtt tgagcctctg agccaggtga
841 gtttgggatc cacagccctc agaaaacctt caccccttag gaacagagac caaactgaaa
901 taatgacctg tggaatgatt ccatgcctgc taaaaactcg agggacaagg aacagactca
961 taaattatta attggccttt gtttatgttt caaagtaaat ggtcgttttc tttatgctaa
1021 gtctttgtac ctggcacccc catccataca cttttttaag gtaggttaga tgtggttaaa
1081 aatgacagta aacccaccag caagcaaaaa taatcttaga aagtgagagg aggtcactga
1141 aacctggcct gaggtttgaa gaagatggag aagagttata tttattgaga accggctctg
1201 tgccaggcac tagatgttcc tccacttacg atggggttac ctcccgttga aactattgta
1261 agttgaaaat atggtaattt gaaaatgcac ttaatacccc taacctacta aacatcatgg
1321 cttagcctag cctaccttaa acatgctcag aacacctaaa gttgagcaaa atcatctaac
1381 agaaagcctg ttttataata aaatgttgaa tatctcatgt aaaaaaaaaa aaaaa
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