LOCUS BC028171 2630 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens sulfotransferase family 4A, member 1, mRNA (cDNA clone MGC:40032 IMAGE:5243984), complete cds. ACCESSION BC028171 VERSION BC028171.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2630) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2630) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 62 Row: n Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, GenomeScan gene prediction, Similarity but not identity to protein The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..2630 /db_xref="H-InvDB:HIT000040475" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:40032 IMAGE:5243984" /tissue_type="Brain, fetal, whole pooled" /clone_lib="NIH_MGC_121" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2630 /gene="SULT4A1" /gene_synonym="BR-STL-1" /gene_synonym="BRSTL1" /gene_synonym="DJ388M5.3" /gene_synonym="hBR-STL-1" /gene_synonym="NST" /gene_synonym="SULTX3" /db_xref="GeneID:25830" /db_xref="HGNC:HGNC:14903" /db_xref="MIM:608359" CDS 89..871 /gene="SULT4A1" /gene_synonym="BR-STL-1" /gene_synonym="BRSTL1" /gene_synonym="DJ388M5.3" /gene_synonym="hBR-STL-1" /gene_synonym="NST" /gene_synonym="SULTX3" /codon_start=1 /product="SULT4A1 protein" /protein_id="AAH28171.1" /db_xref="GeneID:25830" /db_xref="HGNC:HGNC:14903" /db_xref="MIM:608359" /translation="MAESEAETPSTPGEFESKYFEFHGVRLPPFCRGKMEEIANFPVR PSDVWIVTYPKSGTSLLQEVVYLVSQGADPDEIGLMNIDEQLPVLEYPQPGLDIIKEL TSPRLIKSHLPYRFLPSDLHNGDSKVIYMARNPKDLVVSYYQFHRSLRTMSYRGTFQE FCRRFMNDKLGYGSWFEHVQEFWEHRMDSNVLFLKYEDMHRDLVTMVEQLARFLGVSC DKAQLEALTEHCHQLVDQCCNAEALPVGRAHCVFARKIFLSW" BASE COUNT 631 a 619 c 742 g 638 t ORIGIN 1 cgcgagcgtg tgcggggcgc gggcgcgggc gcgggcgcgt gcgggctgcg agccgggagg 61 cggcggcggc gacggcgacg gcggcggcat ggcggagagc gaggccgaga cccccagcac 121 cccgggggag ttcgagagca agtacttcga gttccatggc gtgcggctgc cgcccttctg 181 ccgcgggaag atggaggaga tcgccaactt cccggtgcgg cccagcgacg tgtggatcgt 241 cacctacccc aagtccggca ccagcttgct gcaggaggtg gtctacttgg tgagccaggg 301 cgctgacccc gatgagatcg gcttgatgaa catcgacgag cagctcccgg tcctggagta 361 cccacagccg ggcctggaca tcatcaagga actgacctct ccccgcctca tcaagagcca 421 cctgccctac cgctttctgc cctctgacct ccacaatgga gactccaagg tcatctatat 481 ggctcgcaac cccaaggatc tggtggtgtc ttattatcag ttccaccgct ctctgcggac 541 catgagctac cgaggcacct ttcaagaatt ctgccggagg tttatgaatg ataagctggg 601 ctacggctcc tggtttgagc acgtgcagga gttctgggag caccgcatgg actcgaacgt 661 gctttttctc aagtatgaag acatgcatcg ggacctggtg acgatggtgg agcagctggc 721 cagattcctg ggggtgtcct gtgacaaggc ccagctggaa gccctgacgg agcactgcca 781 ccagctggtg gaccagtgct gcaacgctga ggccctgccc gtgggccggg cacattgcgt 841 ctttgctcgg aagatcttct tgagttggtg agaatgcagg gccgagtagc cagctgcatt 901 gcttagattt gattcatgtc acagcataaa ttgtcttgat tccaaatcct aaaccaggaa 961 gagttgggct gtggaaggac atcttcaccg tctccatgaa tgagaagttt gacttggtgt 1021 ataaacagaa gatgggaaag tgtgacctca cgtttgactt ttatttataa taacagaaac 1081 aacaacctgc atgctcacaa tacccagaca gtctactagc caaaagtcct gtatgcattc 1141 atttattcct tgctggacaa actctggaag cagcgtgtga aacagcgggg gaagggaaga 1201 gcggcgtgag cggagggagt gtgatgattc ccaaccgaaa gcagctgtct cgcctttaga 1261 acgtgcagcc tctccatgtc tgattacaaa cagtctccac attgcagttc caatggcctg 1321 gaccgtaagg ataaagcctg taatatatgc aactagaatg tctgcctttt caaccccgta 1381 ttatttattg tattttatag agcttttcac tggaaatcta cataaatgtc agtaaaccaa 1441 ataaaagttc atttccaagg ggaatcagga gcgagccaca cccgaatggt agaaagatct 1501 cagggttaac tctttatttt tgtagtttta ttatctaagg cacagccatt ctgttctcac 1561 ttggttctga gatagtggtg agaacagagg atgagttggg tctgttgggg ggaatctgga 1621 cacttgttta ttctgacgga gttcacttct tcagaacctt cctgaaatga gcagaaattg 1681 ttcactaggt cttcagaatg gacgtccttc tgccagagac ttccagcggg cggctccaaa 1741 ggcccaatgc agaggagccc gcggagcatg tgctgaggga agtctgcctg gtgaggctgg 1801 caggtgggag tctaatgcag tcaggagcat ttgcatgcag tgggtggaga gtcggccacc 1861 aaaggaccga gttgcgctcg gaatttgagc tgaattccac agccttactt tgtttcctga 1921 agtgatagcc tactaatgct ggcaagcaga tgcttaatag taaatttcta aaatccccgg 1981 gtctttatca ttcagtttgt tctgtgcacc tgaggcgctc agccgtggga ggaccatttt 2041 gcgagtgtag ccctgtttca ctcggatcag gttggcacgg ccgcctgcgt gtctgtccac 2101 ctcatccctc cgtgtatctg agggagtaaa ggtgaggtct ttattgcttc actgcctaat 2161 tttctcaccc acattcgctg aagcgatgga gagtcggggg ccagtagcca gccaaccccg 2221 tggggaccgg ggttgtctgt catttatgtg gctggaaagc acccaaagtg gtggtcagga 2281 gggtcgctgc tgtggaaggg gtctccgttc ttggtgctgt atttgaaacg ggtgtagaga 2341 gaagcttgtg tttttgtttg taatggggag aagcgtggcc aggcaggtgg cacgtggcat 2401 cgcatggtgg gctcggcagc accttgcctg tgtttctgtg agggaggctg ctttctgtga 2461 aatttcattt atatttttct atttttagta ctgtatggat gttactgagc actacacatg 2521 atccttctgt gcttgcttgc atctttaata aagacatgtt cccggaaaaa aaaaaaaaaa 2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //