LOCUS       BC028148                1676 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens tumor necrosis factor (TNF superfamily, member 2),
            mRNA (cDNA clone MGC:39905 IMAGE:5217636), complete cds.
ACCESSION   BC028148
VERSION     BC028148.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1676)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 62 Row: j Column: 9
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 25952110.
FEATURES             Location/Qualifiers
     source          1..1676
                     /db_xref="H-InvDB:HIT000040462_10"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:39905 IMAGE:5217636"
                     /tissue_type="Blood, adult leukocytes"
                     /clone_lib="NIH_MGC_118"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1676
                     /gene="TNF"
                     /gene_synonym="DIF"
                     /gene_synonym="TNF-alpha"
                     /gene_synonym="TNFSF2"
                     /db_xref="GeneID:7124"
                     /db_xref="HGNC:HGNC:11892"
                     /db_xref="MIM:191160"
     CDS             158..859
                     /gene="TNF"
                     /gene_synonym="DIF"
                     /gene_synonym="TNF-alpha"
                     /gene_synonym="TNFSF2"
                     /codon_start=1
                     /product="tumor necrosis factor (TNF superfamily, member
                     2)"
                     /protein_id="AAH28148.1"
                     /db_xref="GeneID:7124"
                     /db_xref="HGNC:HGNC:11892"
                     /db_xref="MIM:191160"
                     /translation="MSTESMIRDVELAEEALPKKTGGPQGSRRCLFLSLFSFLIVAGA
                     TTLFCLLHFGVIGPQREEFPRDLSLISPLAQAVRSSSRTPSDKPVAHVVANPQAEGQL
                     QWLNRRANALLANGVELRDNQLVVPSEGLYLIYSQVLFKGQGCPSTHVLLTHTISRIA
                     VSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYLGGVFQLEKGDRLSAEINRPDYL
                     DFAESGQVYFGIIAL"
BASE COUNT          399 a          496 c          402 g          379 t
ORIGIN      
        1 ggacagcaga ggaccagcta agagggagag aagcaactac agaccccccc tgaaaacaac
       61 cctcagacgc cacatcccct gacaagctgc caggcaggtt ctcttcctct cacatactga
      121 cccacggctc caccctctct cccctggaaa ggacaccatg agcactgaaa gcatgatccg
      181 ggacgtggag ctggccgagg aggcgctccc caagaagaca ggggggcccc agggctccag
      241 gcggtgcttg ttcctcagcc tcttctcctt cctgatcgtg gcaggcgcca ccacgctctt
      301 ctgcctgctg cactttggag tgatcggccc ccagagggaa gagttcccca gggacctctc
      361 tctaatcagc cctctggccc aggcagtcag atcatcttct cgaaccccga gtgacaagcc
      421 tgtagcccat gttgtagcaa accctcaagc tgaggggcag ctccagtggc tgaaccgccg
      481 ggccaatgcc ctcctggcca atggcgtgga gctgagagat aaccagctgg tggtgccatc
      541 agagggcctg tacctcatct actcccaggt cctcttcaag ggccaaggct gcccctccac
      601 ccatgtgctc ctcacccaca ccatcagccg catcgccgtc tcctaccaga ccaaggtcaa
      661 cctcctctct gccatcaaga gcccctgcca gagggagacc ccagaggggg ctgaggccaa
      721 gccctggtat gagcccatct atctgggagg ggtcttccag ctggagaagg gtgaccgact
      781 cagcgctgag atcaatcggc ccgactatct cgactttgcc gagtctgggc aggtctactt
      841 tgggatcatt gccctgtgag gaggacgaac atccaacctt cccaaacgcc tcccctgccc
      901 caatcccttt attaccccct ccttcagaca ccctcaacct cttctggctc aaaaagagaa
      961 ttgggggctt agggtcggaa cccaagctta gaactttaag caacaagacc accacttcga
     1021 aacctgggat tcaggaatgt gtggcctgca cagtgaagtg ctggcaacca ctaagaattc
     1081 aaactggggc ctccagaact cactggggcc tacagctttg atccctgaca tctggaatct
     1141 ggagaccagg gagcctttgg ttctggccag aatgctgcag gacttgagaa gacctcacct
     1201 agaaattgac acaagtggac cttaggcctt cctctctcca gatgtttcca gacttccttg
     1261 agacacggag cccagccctc cccatggagc cagctccctc tatttatgtt tgcacttgtg
     1321 attatttatt atttatttat tatttattta tttacagatg aatgtattta tttgggagac
     1381 cggggtatcc tgggggaccc aatgtaggag ctgccttggc tcagacatgt tttccgtgaa
     1441 aacggagctg aacaataggc tgttcccatg tagccccctg gcctctgtgc cttcttttga
     1501 ttatgttttt taaaatattt atctgattaa gttgtctaaa caatgctgat ttggtgacca
     1561 actgtcactc attgctgagc ctctgctccc caggggagtt gtgtctgtaa tcgccctact
     1621 attcagtggc gagaaataaa gtttgcttag aaaaaaaaaa aaaaaaaaaa aaaaaa
//