LOCUS BC028145 1238 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens thrombospondin 1, mRNA (cDNA clone IMAGE:5217975),
partial cds.
ACCESSION BC028145
VERSION BC028145.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1238)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1238)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40317625.
FEATURES Location/Qualifiers
source 1..1238
/db_xref="H-InvDB:HIT000091508"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5217975"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1238
/gene="THBS1"
/gene_synonym="THBS"
/gene_synonym="TSP"
/gene_synonym="TSP1"
/db_xref="GeneID:7057"
/db_xref="HGNC:HGNC:11785"
/db_xref="MIM:188060"
CDS 35..>1238
/gene="THBS1"
/gene_synonym="THBS"
/gene_synonym="TSP"
/gene_synonym="TSP1"
/codon_start=1
/product="THBS1 protein"
/protein_id="AAH28145.1"
/db_xref="GeneID:7057"
/db_xref="HGNC:HGNC:11785"
/db_xref="MIM:188060"
/translation="MGLAWGLGVLFLMHVCGTNRIPESGGDNSVFDIFELTGAARKGS
GRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRG
TLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFV
QEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVNDNFQGVLQNVRFV
FGTTPEDILRNKGCSSSTSVLLTLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDE
LSSMVLELRGLRTIVTTLQDSIRKVTEENKELANELRRPPLCYHNGVQYRNNEEWTVD
SCTECHCQNSVTICKKVSCPIMPCSNATVPDGECCPRCWPSDSADDGWSPWSEWTSCS
TSCGNGIQQ"
BASE COUNT 282 a 361 c 351 g 244 t
ORIGIN
1 cacaggatcc ctgctgggca ccaacagctc caccatgggg ctggcctggg gactaggcgt
61 cctgttcctg atgcatgtgt gtggcaccaa ccgcattcca gagtctggcg gagacaacag
121 cgtgtttgac atctttgaac tcaccggggc cgcccgcaag gggtctgggc gccgactggt
181 gaagggcccc gacccttcca gcccagcttt ccgcatcgag gatgccaacc tgatcccccc
241 tgtgcctgat gacaagttcc aagacctggt ggatgctgtg cgggcagaaa agggtttcct
301 ccttctggca tccctgaggc agatgaagaa gacccggggc acgctgctgg ccctggagcg
361 gaaagaccac tctggccagg tcttcagcgt ggtgtccaat ggcaaggcgg gcaccctgga
421 cctcagcctg accgtccaag gaaagcagca cgtggtgtct gtggaagaag ctctcctggc
481 aaccggccag tggaagagca tcaccctgtt tgtgcaggaa gacagggccc agctgtacat
541 cgactgtgaa aagatggaga atgctgagtt ggacgtcccc atccaaagcg tcttcaccag
601 agacctggcc agcatcgcca gactccgcat cgcaaagggg ggcgtcaatg acaatttcca
661 gggggtgctg cagaatgtga ggtttgtctt tggaaccaca ccagaagaca tcctcaggaa
721 caaaggctgc tccagctcta ccagtgtcct cctcaccctt gacaacaacg tggtgaatgg
781 ttccagccct gccatccgca ctaactacat tggccacaag acaaaggact tgcaagccat
841 ctgcggcatc tcctgtgatg agctgtccag catggtcctg gaactcaggg gcctgcgcac
901 cattgtgacc acgctgcagg acagcatccg caaagtgact gaagagaaca aagagttggc
961 caatgagctg aggcggcctc ccctatgcta tcacaacgga gttcagtaca gaaataacga
1021 ggaatggact gttgatagct gcactgagtg tcactgtcag aactcagtta ccatctgcaa
1081 aaaggtgtcc tgccccatca tgccctgctc caatgccaca gttcctgatg gagaatgctg
1141 tcctcgctgt tggcccagcg actctgcgga cgatggctgg tctccatggt ccgagtggac
1201 ctcctgttct acgagctgtg gcaatggaat tcagcagc
//