LOCUS BC028139 3439 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ATPase, Ca++ transporting, type 2C, member 1, mRNA (cDNA clone MGC:39950 IMAGE:5215224), complete cds. ACCESSION BC028139 VERSION BC028139.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3439) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3439) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 62 Row: h Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48762690. FEATURES Location/Qualifiers source 1..3439 /db_xref="H-InvDB:HIT000040459" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39950 IMAGE:5215224" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3439 /gene="ATP2C1" /gene_synonym="ATP2C1A" /gene_synonym="HHD" /gene_synonym="hSPCA1" /gene_synonym="KIAA1347" /gene_synonym="PMR1" /gene_synonym="SPCA1" /db_xref="GeneID:27032" /db_xref="HGNC:HGNC:13211" /db_xref="MIM:604384" CDS 193..2859 /gene="ATP2C1" /gene_synonym="ATP2C1A" /gene_synonym="HHD" /gene_synonym="hSPCA1" /gene_synonym="KIAA1347" /gene_synonym="PMR1" /gene_synonym="SPCA1" /codon_start=1 /product="ATPase, Ca++ transporting, type 2C, member 1" /protein_id="AAH28139.1" /db_xref="GeneID:27032" /db_xref="HGNC:HGNC:13211" /db_xref="MIM:604384" /translation="MKVARFQKIPNGENETMIPVLTSKKASELPVSEVASILQADLQN GLNKCEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISVLMHQFDD AVSITVAILIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDT VCLSVGDRVPADLRLFEAVDLSIDESSLTGETTPCSKVTAPQPAATNGDLASRSNIAF MGTLVRCGKAKGVVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFYSFGI IGIIMLVGWLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKK LPIVETLGCCNVICSDKTGTLTKNEMTVTHIFTSDGLHAEVTGVGYNQFGEVIVDGDV VHGFYNPAVSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYIRKA EYPFSSEQKWMAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYQSKGQTLTLTQQQRD VYQQEKARMGSAGLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSI KMITGDSQETAVAIASRLGLYSKTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRH KMKIIKSLQKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDF QTIMSAIEEGKGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINII MDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWREL RDNVITPRDTTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNRMFCYAVLGSIMGQL LVIYFPPLQKVFQTESLSILGLALGEEWTAAG" BASE COUNT 1043 a 648 c 777 g 971 t ORIGIN 1 ccggggcttt ggatgctgct gctaggggtg gtgggagcag ccgtgggacg cgtggccggg 61 agcgggggtg acagcctggg attccggggg cttctcttcc ttgtcctcct cctctcctct 121 ctattcccag tgtggccgtg gctgacacta aagactttgt agccatcaac ccgagtgcag 181 tttcgatgga aaatgaaggt tgcacgtttt caaaaaatac ctaatggtga aaatgagaca 241 atgattcctg tattgacatc aaaaaaagca agtgaattac cagtcagtga agttgcaagc 301 attctccaag ctgatcttca gaatggtcta aacaaatgtg aagttagtca taggcgagcc 361 tttcatggct ggaatgagtt tgatattagt gaagatgagc cactgtggaa gaagtatatt 421 tctcagttta aaaatcccct tattatgctg cttctggctt ctgcagtcat cagtgtttta 481 atgcatcagt ttgatgatgc cgtcagtatc actgtggcaa tacttatcgt tgttacagtt 541 gcctttgttc aggaatatcg ttcagaaaaa tctcttgaag aattgagtaa acttgtgcca 601 ccagaatgcc attgtgtgcg tgaaggaaaa ttggagcata cacttgcccg agacttggtt 661 ccaggtgata cagtttgcct ttctgttggg gatagagttc ctgctgactt acgcttgttt 721 gaggctgtgg atctttccat tgatgagtcc agcttgacag gtgagacaac gccttgttct 781 aaggtgacag ctcctcagcc agctgcaact aatggagatc ttgcatcgag aagtaacatt 841 gcctttatgg gaacactggt cagatgtggc aaagcaaagg gtgttgtcat tggaacagga 901 gaaaattctg aatttgggga ggtttttaaa atgatgcaag cagaagaggc accaaaaacc 961 cctctgcaga agagcatgga cctcttagga aaacaacttt ccttttactc ctttggtata 1021 ataggaatca tcatgttggt tggctggtta ctgggaaaag atatcctgga aatgtttact 1081 attagtgtaa gtttggctgt agcagcaatt cctgaaggtc tccccattgt ggtcacagtg 1141 acgctagctc ttggtgttat gagaatggtg aagaaaaggg ccattgtgaa aaagctgcct 1201 attgttgaaa ctctgggctg ctgtaatgtg atttgttcag ataaaactgg aacactgacg 1261 aagaatgaaa tgactgttac tcacatattt acttcagatg gtctgcatgc tgaggttact 1321 ggagttggct ataatcaatt tggggaagtg attgttgatg gtgatgttgt tcatggattc 1381 tataacccag ctgttagcag aattgttgag gcgggctgtg tgtgcaatga tgctgtaatt 1441 agaaacaata ctctaatggg gaagccaaca gaaggggcct taattgctct tgcaatgaag 1501 atgggtcttg atggacttca acaagactac atcagaaaag ctgaataccc ttttagctct 1561 gagcaaaagt ggatggctgt taagtgtgta caccgaacac agcaggacag accagagatt 1621 tgttttatga aaggtgctta cgaacaagta attaagtact gtactacata ccagagcaaa 1681 gggcagacct tgacacttac tcagcagcag agagatgtgt accaacaaga gaaggcacgc 1741 atgggctcag cgggactcag agttcttgct ttggcttctg gtcctgaact gggacagctg 1801 acatttcttg gcttggtggg aatcattgat ccacctagaa ctggtgtgaa agaagctgtt 1861 acaacactca ttgcctcagg agtatcaata aaaatgatta ctggagattc acaggagact 1921 gcagttgcaa tcgccagtcg tctgggattg tattccaaaa cttcccagtc agtctcagga 1981 gaagaaatag atgcaatgga tgttcagcag ctttcacaaa tagtaccaaa ggttgcagta 2041 ttttacagag ctagcccaag gcacaagatg aaaattatta agtcgctaca gaagaacggt 2101 tcagttgtag ccatgacagg agatggagta aatgatgcag ttgctctgaa ggctgcagac 2161 attggagttg cgatgggcca gactggtaca gatgtttgca aagaggcagc agacatgatc 2221 ctagtggatg atgattttca aaccataatg tctgcaatcg aagagggtaa agggatttat 2281 aataacatta aaaatttcgt tagattccag ctgagcacga gtatagcagc attaacttta 2341 atctcattgg ctacattaat gaactttcct aatcctctca atgccatgca gattttgtgg 2401 atcaatatta ttatggatgg acccccagct cagagccttg gagtagaacc agtggataaa 2461 gatgtcattc gtaaacctcc tcgcaactgg aaagacagca ttttgactaa aaacttgata 2521 cttaaaatac ttgtttcatc aataatcatt gtttgtggga ctttgtttgt cttctggcgt 2581 gagctacgag acaatgtgat tacacctcga gacacaacaa tgaccttcac atgctttgtg 2641 ttttttgaca tgttcaatgc actaagttcc agatcccaga ccaagtctgt gtttgagatt 2701 ggactctgca gtaatagaat gttttgctat gcagttcttg gatccatcat gggacaatta 2761 ctagttattt actttcctcc gcttcagaag gtttttcaga ctgagagcct aagcatactg 2821 ggtctggctc tgggagagga gtggacagca gctggttgag atacatcccc atctggagac 2881 aggactgcca ctgacagaag atgtgagctg tgtctaagtc cagtcttgtg cccagccgtg 2941 tctgcgcctt cactctttgg aactctgcat acaacatctt agcaccatct tcctgcagct 3001 cttccttacc taaataaaga aacagcccaa gggcagtatt tctaaaagca ctgtaacagc 3061 ttttcatttt ctccacatat actacaaatt ctataaagaa agaaattaat ttaaaaaaac 3121 taagatgttt ttctcttctg gcttcataaa tgccttgctg tataaattga aatattgata 3181 ctgaactgtc tttttaatga tgacctaact ttattcaacc catcggaatt tactttttcc 3241 ctgaaataag atcttttcca ctggtctact acctgaccat aaacatgtct gcatttgaat 3301 tctctaaacc ctaaatctgt gtctatgaaa aatacaaatg actattaaat attaaaaaaa 3361 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3421 aaaaaaaaaa aaaaaaaaa //