LOCUS BC028128 2210 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens arginine decarboxylase, mRNA (cDNA clone MGC:40111
IMAGE:5164244), complete cds.
ACCESSION BC028128
VERSION BC028128.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2210)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2210)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: d Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543358.
FEATURES Location/Qualifiers
source 1..2210
/db_xref="H-InvDB:HIT000050936"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40111 IMAGE:5164244"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2210
/gene="ADC"
/gene_synonym="KIAA1945"
/gene_synonym="ODC-p"
/gene_synonym="ODC1L"
/db_xref="GeneID:113451"
/db_xref="HGNC:HGNC:29957"
CDS 588..1970
/gene="ADC"
/gene_synonym="KIAA1945"
/gene_synonym="ODC-p"
/gene_synonym="ODC1L"
/codon_start=1
/product="arginine decarboxylase"
/protein_id="AAH28128.1"
/db_xref="GeneID:113451"
/db_xref="HGNC:HGNC:29957"
/translation="MAGYLSESDFVMVEEGFSTRDLLKELTLGASQATTDEVAAFFVA
DLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMELVQHI
GIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIATDD
SHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL
VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAEL
GRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDN
ICPTPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTV
GMGSPFWGTQACHITYAMSRVAWEALRRQLMAAEQEDDVEGVCKPLSCGWEITDTLCV
GPVFTPASIM"
BASE COUNT 462 a 615 c 681 g 452 t
ORIGIN
1 tgggcggggt tatataagcc agcggcgggc ggaaggcggg gcgtgggggt ctgtggctgc
61 tgggctggcg gggcgcaggc cgcgggaccc gagcccgggg aagcgagaga gcggaggcgc
121 cgaggatccg attcactccc tggggagacc tatgggccga agccgtgtaa atgcgtttta
181 agcagaggcc tcggctccgc aactgccact cctcctcggg gtgttgcaca agtttcgagg
241 tcaccggcga ccccccctag cagcgcgcct ggctctggcc cccgcgaagg aggacggagt
301 ttggagcttg cggcccccac ccaccgcgtg gcgtccccag gcacgcctag aattctagca
361 cctcaggatc agtccagccc ccatttacaa ttggggaaac tgcggctccg aaagggtcag
421 agggtacccg aggtcaagca gtagagagcg gactcgaact taagctcttg ctcttaggct
481 gagacgcctt gatgtggcca ccggctaccc tctagtgtgt tgcatacttt ctaaggcggc
541 ggctgcagca gcggctccat ccagcccgtc agctcctcct gcaaggcatg gctggctacc
601 tgagtgaatc ggactttgtg atggtggagg agggcttcag tacccgagac ctgctgaagg
661 aactcactct gggggcctca caggccacca cggacgaggt agctgccttc ttcgtggctg
721 acctgggtgc catagtgagg aagcactttt gctttctgaa gtgcctgcca cgagtccggc
781 ccttttatgc tgtcaagtgc aacagcagcc caggtgtgct gaaggttctg gcccagctgg
841 ggctgggctt tagctgtgcc aacaaggcag agatggagtt ggtccagcat attggaatcc
901 ctgccagtaa gatcatctgc gccaacccct gtaagcaaat tgcacagatc aaatatgctg
961 ccaagcatgg gatccagctg ctgagctttg acaatgagat ggagctggca aaggtggtaa
1021 agagccaccc cagtgccaag atggttctgt gcattgctac cgatgactcc cactccctga
1081 gctgcctgag cctaaagttt ggagtgtcac tgaaatcctg cagacacctg cttgaaaatg
1141 cgaagaagca ccatgtggag gtggtgggtg tgagttttca cattggcagt ggctgtcctg
1201 accctcaggc ctatgctcag tccatcgcag acgcccggct cgtgtttgaa atgggcaccg
1261 agctgggtca caagatgcac gttctggacc ttggtggtgg cttccctggc acagaagggg
1321 ccaaagtgag atttgaagag attgcttccg tgatcaactc agccttggac ctgtacttcc
1381 cagagggctg tggcgtggac atctttgctg agctggggcg ctactacgtg acctcggcct
1441 tcactgtggc agtcagcatc attgccaaga aggaggttct gctagaccag cctggcaggg
1501 aggaggaaaa tggttccacc tccaagacca tcgtgtacca ccttgatgag ggcgtgtatg
1561 ggatcttcaa ctcagtcctg tttgacaaca tctgccctac ccccatcctg cagaagaaac
1621 catccacgga gcagcccctg tacagcagca gcctgtgggg cccggcggtt gatggctgtg
1681 attgcgtggc tgagggcctg tggctgccgc aactacacgt aggggactgg ctggtctttg
1741 acaacatggg cgcctacact gtgggcatgg gttccccctt ttgggggacc caggcctgcc
1801 acatcaccta tgccatgtcc cgggtggcct gggaagcgct gcgaaggcag ctgatggctg
1861 cagaacagga ggatgacgtg gagggtgtgt gcaagcctct gtcctgcggc tgggagatca
1921 cagacaccct gtgcgtgggc cctgtcttca ccccagcgag catcatgtga gtgggcctcg
1981 ttccccccgg agaatcccag cggggcctca gagatgcatc tgggagaggt ggggaagatg
2041 gcaggcaagg gtacccttgg ccaggactct ggtgcccacc ctgccacccc cgcgctccac
2101 ctgcagtgtt tctgccctgt aaataggacc agtcttacac tcgctgtagt tcaagtatgc
2161 aacataaatc ctgttccttc caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//