LOCUS       BC028125                1888 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens nucleoporin 50kDa, mRNA (cDNA clone MGC:39961
            IMAGE:5166132), complete cds.
ACCESSION   BC028125
VERSION     BC028125.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1888)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 62 Row: d Column: 15
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 24497446.
FEATURES             Location/Qualifiers
     source          1..1888
                     /db_xref="H-InvDB:HIT000040452"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:39961 IMAGE:5166132"
                     /tissue_type="Brain, adult medulla"
                     /clone_lib="NIH_MGC_119"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1888
                     /gene="NUP50"
                     /gene_synonym="MGC39961"
                     /gene_synonym="NPAP60"
                     /db_xref="GeneID:10762"
                     /db_xref="HGNC:HGNC:8065"
                     /db_xref="MIM:604646"
     CDS             373..1695
                     /gene="NUP50"
                     /gene_synonym="MGC39961"
                     /gene_synonym="NPAP60"
                     /codon_start=1
                     /product="nucleoporin 50kDa"
                     /protein_id="AAH28125.1"
                     /db_xref="GeneID:10762"
                     /db_xref="HGNC:HGNC:8065"
                     /db_xref="MIM:604646"
                     /translation="MASEEVLKNRAIKKAKRRNVGFESDTGGAFKGFKGLVVPSGGGR
                     FSGFGSGAGGKPLEGLSNGNNITSAPPFASAKAAADPKVAFGSLAANGPTTLVDKVSN
                     PKTNGDSQQPSSSGLASSKACVGNAYHKQLAALNCSVRDWIVKHVNTNPLCDLTPIFK
                     DYEKYLANIEQQHGNSGRNSESESNKVAAETQSPSLFGSTKLQQESTFLFHGNKTEDT
                     PDKKMEVASEKKTDPSSLGATSASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNSSLFG
                     KDTTQSKPVSSPFPTKPLEGQAEGDSGECKGGDEEENDEPPKVVVTEVKEEDAFYSKK
                     CKLFYKKDNEFKEKGIGTLHLKPTANQKTQLLVRADTNLGNILLNVLIPPNMPCTRTG
                     KNNVLIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEKKDA"
BASE COUNT          586 a          400 c          453 g          449 t
ORIGIN      
        1 gccccggctg tttttgaagc ggggcccggg cctcaccggg ctgcggcgtc cgactcgagt
       61 gagactctcc cctgcggccc cgccggaggt tcgaaaacat ggccaaaaga aatgccgaga
      121 aggaactgac agataggaat tgggatcaag aagatgaagc tgaagagggt aaaagaaggg
      181 ctataaacta aagccgaaga tattcagcag ctttctgacg tggacatcag aagtgtggac
      241 atgagtgtgc tttgagcgca ctgtggaaga gcagtggttg tccagcaagg tcctaggtgc
      301 ctccgtggcc tttcgtacag tgggcaagtt gggcaggact catcttaaaa atcatgtgtg
      361 ggaacattct ccatggccag tgaggaagtc ttgaagaata gagccataaa gaaagcaaag
      421 cgcagaaatg ttggatttga atctgacact ggaggagcct ttaaaggttt taaaggtttg
      481 gtggtacctt ctggaggagg acgcttttct ggatttggta gtggcgctgg agggaagcct
      541 ttggaaggac tgtcgaatgg aaacaacata accagtgccc ctcccttcgc cagtgcaaag
      601 gcagcggcag atcccaaggt agcctttggt tctcttgctg caaatggccc taccaccttg
      661 gttgataaag tttcaaatcc caaaactaat ggggacagtc agcagccctc ctcctctggc
      721 cttgcttcca gtaaagcttg tgtcggaaat gcctatcaca agcagttggc cgccttgaac
      781 tgctccgtgc gggattggat agtgaagcac gtgaatacaa accccctctg tgatctgaca
      841 cctatcttta aagactatga gaaatattta gcaaacattg aacagcaaca cgggaacagt
      901 ggcaggaatt ctgaaagtga atctaacaaa gtggcagctg aaacacagtc tccttccctt
      961 tttggctcaa caaaattaca gcaagagtca acgtttttgt ttcatggcaa caaaactgaa
     1021 gatacacctg acaagaagat ggaggtggca tctgaaaaga aaacggaccc atcatcacta
     1081 ggagcgacaa gtgcctcatt taatttcggc aagaaagttg atagctctgt tttgggctca
     1141 ttaagctctg tccccctgac tggattttct ttctcccctg gaaactccag tttatttggc
     1201 aaagatacta cccagagtaa accagtctct tcaccatttc ccactaaacc attggagggc
     1261 caagcagaag gtgacagtgg tgaatgcaaa ggtggagatg aagaagagaa tgatgagcca
     1321 cccaaagtag tagttaccga agtaaaagaa gaagatgctt tttactccaa aaagtgtaaa
     1381 ctgttttaca agaaagacaa tgagtttaaa gagaaaggca taggtactct gcatttaaaa
     1441 cctacagcaa atcagaagac acagcttttg gtgcgggcag acaccaattt aggcaacata
     1501 ttgctgaacg ttctgattcc acccaatatg ccatgtacgc gaacagggaa gaataacgtt
     1561 cttatcgtct gtgttccaaa tccaccaatt gacgagaaga atgccaccat gccagtcacc
     1621 atgttgattc gggtaaaaac cagcgaggat gcagacgagt tgcacaaaat tttactggag
     1681 aaaaaggatg cctgaacacg caaagtcggc tgcagaatta ttgccaagtt tttttgctgc
     1741 ttccaccgcc ccttaaagtt agtcagtttt tcttctcttc tttgacattc taagaactta
     1801 tagataactt aaaacttttg tgaggaagat taatgtggcc aataaaacct ttaaatgtta
     1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//