LOCUS       BC028069                3507 bp    mRNA    linear   HUM 16-DEC-2006
DEFINITION  Homo sapiens NLR family, pyrin domain containing 12, mRNA (cDNA
            clone MGC:40117 IMAGE:5212737), complete cds.
ACCESSION   BC028069
VERSION     BC028069.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3507)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3507)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 62 Row: g Column: 10
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 21955153.
FEATURES             Location/Qualifiers
     source          1..3507
                     /db_xref="H-InvDB:HIT000040422"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:40117 IMAGE:5212737"
                     /tissue_type="Blood, adult leukocytes"
                     /clone_lib="NIH_MGC_118"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3507
                     /gene="NLRP12"
                     /gene_synonym="CLR19.3"
                     /gene_synonym="Monarch1"
                     /gene_synonym="PAN6"
                     /gene_synonym="PYPAF7"
                     /gene_synonym="RNO"
                     /gene_synonym="RNO2"
                     /db_xref="GeneID:91662"
                     /db_xref="HGNC:HGNC:22938"
                     /db_xref="MIM:609648"
     CDS             120..3305
                     /gene="NLRP12"
                     /gene_synonym="CLR19.3"
                     /gene_synonym="Monarch1"
                     /gene_synonym="PAN6"
                     /gene_synonym="PYPAF7"
                     /gene_synonym="RNO"
                     /gene_synonym="RNO2"
                     /codon_start=1
                     /product="NLR family, pyrin domain containing 12"
                     /protein_id="AAH28069.1"
                     /db_xref="GeneID:91662"
                     /db_xref="HGNC:HGNC:22938"
                     /db_xref="MIM:609648"
                     /translation="MLRTAGRDGLCRLSTYLEELEAVELKKFKLYLGTATELGEGKIP
                     WGSMEKAGPLEMAQLLITHFGPEEAWRLALSTFERINRKDLWERGQREDLVRDTPPGG
                     PSSLGNQSTCLLEVSLVTPRKDPQETYRDYVRRKFRLMEDRNARLGECVNLSHRYTRL
                     LLVKEHSNPMQVQQQLLDTGRGHARTVGHQASPIKIETLFEPDEERPEPPRTVVMQGA
                     AGIGKSMLAHKVMLDWADGKLFQGRFDYLFYINCREMNQSATECSMQDLIFSCWPEPS
                     APLQELIRVPERLLFIIDGFDELKPSFHDPQGPWCLCWEEKRPTELLLNSLIRKKLLP
                     ELSLLITTRPTALEKLHRLLEHPRHVEILGFSEAERKEYFYKYFHNAEQAGQVFNYVR
                     DNEPLFTMCFVPLVCWVVCTCLQQQLEGGGLLRQTSRTTTAVYMLYLLSLMQPKPGAP
                     RLQPPPNQRGLCSLAADGLWNQKILFEEQDLRKHGLDGEDVSAFLNMNIFQKDINCER
                     YYSFIHLSFQEFFAAMYYILDEGEGGAGPDQDVTRLLTEYAFSERSFLALTSRFLFGL
                     LNEETRSHLEKSLCWKVSPHIKMDLLQWIQSKAQSDGSTLQQGSLEFFSCLYEIQEEE
                     FIQQALSHFQVIVVSNIASKMEHMVSSFCLKRCRSAQVLHLYGATYSADGEDRARCSA
                     GAHTLLVQLPERTVLLDAYSEHLAAALCTNPNLIELSLYRNALGSRGVKLLCQGLRHP
                     NCKLQNLRLKRCRISSSACEDLSAALIANKNLTRMDLSGNGVGFPGMMLLCEGLRHPQ
                     CRLQMIQLRKCQLESGACQEMASVLGTNPHLVELDLTGNALEDLGLRLLCQGLRHPVC
                     RLRTLWLKICRLTAAACDELASTLSVNQSLRELDLSLNELGDLGVLLLCEGLRHPTCK
                     LQTLRLGICRLGSAACEGLSVVLQANHNLRELDLSFNDLGDWGLWLLAEGLQHPACRL
                     QKLWLDSCGLTAKACENLYFTLGINQTLTDLYLTNNALGDTGVRLLCKRLSHPGCKLR
                     VLWLFGMDLNKMTHSRLAALRVTKPYLDIGC"
BASE COUNT          794 a          994 c         1021 g          698 t
ORIGIN      
        1 gcctctccgc ccgctgcctg tgaatgatgc aatggaaggt gtgctggggt cgccctgtgt
       61 cccgtgcata ggagcatctc agcctccagg tcctctcctt tggggctcac ggcaccccca
      121 tgctacgaac cgcaggcagg gacggcctct gtcgcctgtc cacctacttg gaagaactcg
      181 aggctgtgga actgaagaag ttcaagttat acctggggac cgcgacagag ctgggagaag
      241 gcaagatccc ctggggaagc atggagaagg ccggtcccct ggaaatggcc cagctgctca
      301 tcacccactt cgggccagag gaggcctgga ggttggctct cagcaccttt gagcggataa
      361 acaggaagga cctgtgggag agaggacaga gagaggacct ggtgagggat accccacctg
      421 gtggcccgtc ctcacttggg aaccagtcaa catgccttct ggaagtctct cttgtcactc
      481 caagaaaaga tccccaggaa acctacaggg actatgtccg caggaaattc cggctcatgg
      541 aagaccgcaa tgcgcgccta ggggaatgtg tcaacctcag ccaccggtac acccggctcc
      601 tgctggtgaa ggagcactca aaccccatgc aggtccagca gcagcttctg gacacaggcc
      661 ggggacacgc gaggaccgtg ggacaccagg ctagccccat caagatagag accctctttg
      721 agccagacga ggagcgcccc gagccaccgc gcaccgtggt catgcaaggc gcggcaggga
      781 taggcaagtc catgctggca cacaaggtga tgctggactg ggcggacggg aagctcttcc
      841 aaggcagatt tgattatctc ttctacatca actgcaggga gatgaaccag agtgccacgg
      901 aatgcagcat gcaagacctc atcttcagct gctggcctga gcccagcgcg cctctccagg
      961 agctcatccg agttcccgag cgcctccttt tcatcatcga cggcttcgat gagctcaagc
     1021 cttctttcca cgatcctcag ggaccctggt gcctctgctg ggaggagaaa cggcccacgg
     1081 agctgcttct taacagctta attcggaaga agctgctccc tgagctatct ttgctcatca
     1141 ccacacggcc cacggctttg gagaagctcc accgtctgct ggagcacccc aggcatgtgg
     1201 agatcctggg cttctctgag gcagaaagga aggaatactt ctacaagtat ttccacaatg
     1261 cagagcaggc gggccaagtc ttcaattacg tgagggacaa cgagcctctc ttcaccatgt
     1321 gcttcgtccc cctggtgtgc tgggtggtgt gtacctgcct ccagcagcag ctggagggtg
     1381 gggggctgtt gagacagacg tccaggacca ccactgcagt gtacatgctc tacctgctga
     1441 gtctgatgca acccaagccg ggggccccgc gcctccagcc cccacccaac cagagagggt
     1501 tgtgctcctt ggcggcagat gggctctgga atcagaaaat cctatttgag gagcaggacc
     1561 tccggaagca cggcctagac ggggaagacg tctctgcctt cctcaacatg aacatcttcc
     1621 agaaggacat caactgtgag aggtactaca gcttcatcca cttgagtttc caggaattct
     1681 ttgcagctat gtactatatc ctggacgagg gggagggcgg ggcaggccca gaccaggacg
     1741 tgaccaggct gttgaccgag tacgcgtttt ctgaaaggag cttcctggca ctcaccagcc
     1801 gcttcctgtt tggactcctg aacgaggaga ccaggagcca cctggagaag agtctctgct
     1861 ggaaggtctc gccgcacatc aagatggacc tgttgcagtg gatccaaagc aaagctcaga
     1921 gcgacggctc caccctgcag cagggctcct tggagttctt cagctgcttg tacgagatcc
     1981 aggaggagga gtttatccag caggccctga gccacttcca ggtgatcgtg gtcagcaaca
     2041 ttgcctccaa gatggagcac atggtctcct cgttctgtct gaagcgctgc aggagcgccc
     2101 aggtgctgca cttgtatggc gccacctaca gcgcggacgg ggaagaccgc gcgaggtgct
     2161 ccgcaggagc gcacacgctg ttggtgcagc taccagagag gaccgttctg ctggacgcct
     2221 acagtgaaca tctggcagcg gccctgtgca ccaatccaaa cctgatagag ctgtctctgt
     2281 accgaaatgc cctgggcagc cggggggtga agctgctctg tcaaggactc agacacccca
     2341 actgcaaact tcagaacctg aggctgaaga ggtgccgcat ctccagctca gcctgcgagg
     2401 acctctctgc agctctcata gccaataaga atttgacaag gatggatctc agtggcaacg
     2461 gcgttggatt cccaggcatg atgctgcttt gcgagggcct gcggcatccc cagtgcaggc
     2521 tgcagatgat tcagttgagg aagtgtcagc tggagtccgg ggcttgtcag gagatggctt
     2581 ctgtgctcgg caccaaccca catctggttg agttggacct gacaggaaat gcactggagg
     2641 atttgggcct gaggttacta tgccagggac tgaggcaccc agtctgcaga ctacggactt
     2701 tgtggctgaa gatctgccgc ctcactgctg ctgcctgtga cgagctggcc tcaactctca
     2761 gtgtgaacca gagcctgaga gagctggacc tgagcctgaa tgagctgggg gacctcgggg
     2821 tgctgctgct gtgtgagggc ctcaggcatc ccacgtgcaa gctccagacc ctgcggttgg
     2881 gcatctgccg gctgggctct gccgcctgtg agggtctttc tgtggtgctc caggccaacc
     2941 acaacctccg ggagctggac ttgagtttca acgacctggg agactggggc ctgtggttgc
     3001 tggctgaggg gctgcaacat cccgcctgca gactccagaa actgtggctg gatagctgtg
     3061 gcctcacagc caaggcttgt gagaatcttt acttcaccct ggggatcaac cagaccttga
     3121 ccgaccttta cctgaccaac aacgccctag gggacacagg tgtccgactg ctttgcaagc
     3181 ggctgagcca tcctggctgc aaactccgag tcctctggtt atttgggatg gacctgaata
     3241 aaatgaccca cagtaggttg gcagcgcttc gagtaacaaa accttatttg gacattggct
     3301 gctgaatggt cctatctgct ggctctcccc tgagatctgg acagaggaag atgggagggt
     3361 gctcatcacc cccccagcat aatgatcagc ctccttccta gagacagact catgcagatt
     3421 gagatcaaaa gtccctctgc ttgggatcaa attaatgttt gacagagctg aaaaaaaaaa
     3481 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//