LOCUS BC028069 3507 bp mRNA linear HUM 16-DEC-2006 DEFINITION Homo sapiens NLR family, pyrin domain containing 12, mRNA (cDNA clone MGC:40117 IMAGE:5212737), complete cds. ACCESSION BC028069 VERSION BC028069.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3507) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3507) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 62 Row: g Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21955153. FEATURES Location/Qualifiers source 1..3507 /db_xref="H-InvDB:HIT000040422" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:40117 IMAGE:5212737" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3507 /gene="NLRP12" /gene_synonym="CLR19.3" /gene_synonym="Monarch1" /gene_synonym="PAN6" /gene_synonym="PYPAF7" /gene_synonym="RNO" /gene_synonym="RNO2" /db_xref="GeneID:91662" /db_xref="HGNC:HGNC:22938" /db_xref="MIM:609648" CDS 120..3305 /gene="NLRP12" /gene_synonym="CLR19.3" /gene_synonym="Monarch1" /gene_synonym="PAN6" /gene_synonym="PYPAF7" /gene_synonym="RNO" /gene_synonym="RNO2" /codon_start=1 /product="NLR family, pyrin domain containing 12" /protein_id="AAH28069.1" /db_xref="GeneID:91662" /db_xref="HGNC:HGNC:22938" /db_xref="MIM:609648" /translation="MLRTAGRDGLCRLSTYLEELEAVELKKFKLYLGTATELGEGKIP WGSMEKAGPLEMAQLLITHFGPEEAWRLALSTFERINRKDLWERGQREDLVRDTPPGG PSSLGNQSTCLLEVSLVTPRKDPQETYRDYVRRKFRLMEDRNARLGECVNLSHRYTRL LLVKEHSNPMQVQQQLLDTGRGHARTVGHQASPIKIETLFEPDEERPEPPRTVVMQGA AGIGKSMLAHKVMLDWADGKLFQGRFDYLFYINCREMNQSATECSMQDLIFSCWPEPS APLQELIRVPERLLFIIDGFDELKPSFHDPQGPWCLCWEEKRPTELLLNSLIRKKLLP ELSLLITTRPTALEKLHRLLEHPRHVEILGFSEAERKEYFYKYFHNAEQAGQVFNYVR DNEPLFTMCFVPLVCWVVCTCLQQQLEGGGLLRQTSRTTTAVYMLYLLSLMQPKPGAP RLQPPPNQRGLCSLAADGLWNQKILFEEQDLRKHGLDGEDVSAFLNMNIFQKDINCER YYSFIHLSFQEFFAAMYYILDEGEGGAGPDQDVTRLLTEYAFSERSFLALTSRFLFGL LNEETRSHLEKSLCWKVSPHIKMDLLQWIQSKAQSDGSTLQQGSLEFFSCLYEIQEEE FIQQALSHFQVIVVSNIASKMEHMVSSFCLKRCRSAQVLHLYGATYSADGEDRARCSA GAHTLLVQLPERTVLLDAYSEHLAAALCTNPNLIELSLYRNALGSRGVKLLCQGLRHP NCKLQNLRLKRCRISSSACEDLSAALIANKNLTRMDLSGNGVGFPGMMLLCEGLRHPQ CRLQMIQLRKCQLESGACQEMASVLGTNPHLVELDLTGNALEDLGLRLLCQGLRHPVC RLRTLWLKICRLTAAACDELASTLSVNQSLRELDLSLNELGDLGVLLLCEGLRHPTCK LQTLRLGICRLGSAACEGLSVVLQANHNLRELDLSFNDLGDWGLWLLAEGLQHPACRL QKLWLDSCGLTAKACENLYFTLGINQTLTDLYLTNNALGDTGVRLLCKRLSHPGCKLR VLWLFGMDLNKMTHSRLAALRVTKPYLDIGC" BASE COUNT 794 a 994 c 1021 g 698 t ORIGIN 1 gcctctccgc ccgctgcctg tgaatgatgc aatggaaggt gtgctggggt cgccctgtgt 61 cccgtgcata ggagcatctc agcctccagg tcctctcctt tggggctcac ggcaccccca 121 tgctacgaac cgcaggcagg gacggcctct gtcgcctgtc cacctacttg gaagaactcg 181 aggctgtgga actgaagaag ttcaagttat acctggggac cgcgacagag ctgggagaag 241 gcaagatccc ctggggaagc atggagaagg ccggtcccct ggaaatggcc cagctgctca 301 tcacccactt cgggccagag gaggcctgga ggttggctct cagcaccttt gagcggataa 361 acaggaagga cctgtgggag agaggacaga gagaggacct ggtgagggat accccacctg 421 gtggcccgtc ctcacttggg aaccagtcaa catgccttct ggaagtctct cttgtcactc 481 caagaaaaga tccccaggaa acctacaggg actatgtccg caggaaattc cggctcatgg 541 aagaccgcaa tgcgcgccta ggggaatgtg tcaacctcag ccaccggtac acccggctcc 601 tgctggtgaa ggagcactca aaccccatgc aggtccagca gcagcttctg gacacaggcc 661 ggggacacgc gaggaccgtg ggacaccagg ctagccccat caagatagag accctctttg 721 agccagacga ggagcgcccc gagccaccgc gcaccgtggt catgcaaggc gcggcaggga 781 taggcaagtc catgctggca cacaaggtga tgctggactg ggcggacggg aagctcttcc 841 aaggcagatt tgattatctc ttctacatca actgcaggga gatgaaccag agtgccacgg 901 aatgcagcat gcaagacctc atcttcagct gctggcctga gcccagcgcg cctctccagg 961 agctcatccg agttcccgag cgcctccttt tcatcatcga cggcttcgat gagctcaagc 1021 cttctttcca cgatcctcag ggaccctggt gcctctgctg ggaggagaaa cggcccacgg 1081 agctgcttct taacagctta attcggaaga agctgctccc tgagctatct ttgctcatca 1141 ccacacggcc cacggctttg gagaagctcc accgtctgct ggagcacccc aggcatgtgg 1201 agatcctggg cttctctgag gcagaaagga aggaatactt ctacaagtat ttccacaatg 1261 cagagcaggc gggccaagtc ttcaattacg tgagggacaa cgagcctctc ttcaccatgt 1321 gcttcgtccc cctggtgtgc tgggtggtgt gtacctgcct ccagcagcag ctggagggtg 1381 gggggctgtt gagacagacg tccaggacca ccactgcagt gtacatgctc tacctgctga 1441 gtctgatgca acccaagccg ggggccccgc gcctccagcc cccacccaac cagagagggt 1501 tgtgctcctt ggcggcagat gggctctgga atcagaaaat cctatttgag gagcaggacc 1561 tccggaagca cggcctagac ggggaagacg tctctgcctt cctcaacatg aacatcttcc 1621 agaaggacat caactgtgag aggtactaca gcttcatcca cttgagtttc caggaattct 1681 ttgcagctat gtactatatc ctggacgagg gggagggcgg ggcaggccca gaccaggacg 1741 tgaccaggct gttgaccgag tacgcgtttt ctgaaaggag cttcctggca ctcaccagcc 1801 gcttcctgtt tggactcctg aacgaggaga ccaggagcca cctggagaag agtctctgct 1861 ggaaggtctc gccgcacatc aagatggacc tgttgcagtg gatccaaagc aaagctcaga 1921 gcgacggctc caccctgcag cagggctcct tggagttctt cagctgcttg tacgagatcc 1981 aggaggagga gtttatccag caggccctga gccacttcca ggtgatcgtg gtcagcaaca 2041 ttgcctccaa gatggagcac atggtctcct cgttctgtct gaagcgctgc aggagcgccc 2101 aggtgctgca cttgtatggc gccacctaca gcgcggacgg ggaagaccgc gcgaggtgct 2161 ccgcaggagc gcacacgctg ttggtgcagc taccagagag gaccgttctg ctggacgcct 2221 acagtgaaca tctggcagcg gccctgtgca ccaatccaaa cctgatagag ctgtctctgt 2281 accgaaatgc cctgggcagc cggggggtga agctgctctg tcaaggactc agacacccca 2341 actgcaaact tcagaacctg aggctgaaga ggtgccgcat ctccagctca gcctgcgagg 2401 acctctctgc agctctcata gccaataaga atttgacaag gatggatctc agtggcaacg 2461 gcgttggatt cccaggcatg atgctgcttt gcgagggcct gcggcatccc cagtgcaggc 2521 tgcagatgat tcagttgagg aagtgtcagc tggagtccgg ggcttgtcag gagatggctt 2581 ctgtgctcgg caccaaccca catctggttg agttggacct gacaggaaat gcactggagg 2641 atttgggcct gaggttacta tgccagggac tgaggcaccc agtctgcaga ctacggactt 2701 tgtggctgaa gatctgccgc ctcactgctg ctgcctgtga cgagctggcc tcaactctca 2761 gtgtgaacca gagcctgaga gagctggacc tgagcctgaa tgagctgggg gacctcgggg 2821 tgctgctgct gtgtgagggc ctcaggcatc ccacgtgcaa gctccagacc ctgcggttgg 2881 gcatctgccg gctgggctct gccgcctgtg agggtctttc tgtggtgctc caggccaacc 2941 acaacctccg ggagctggac ttgagtttca acgacctggg agactggggc ctgtggttgc 3001 tggctgaggg gctgcaacat cccgcctgca gactccagaa actgtggctg gatagctgtg 3061 gcctcacagc caaggcttgt gagaatcttt acttcaccct ggggatcaac cagaccttga 3121 ccgaccttta cctgaccaac aacgccctag gggacacagg tgtccgactg ctttgcaagc 3181 ggctgagcca tcctggctgc aaactccgag tcctctggtt atttgggatg gacctgaata 3241 aaatgaccca cagtaggttg gcagcgcttc gagtaacaaa accttatttg gacattggct 3301 gctgaatggt cctatctgct ggctctcccc tgagatctgg acagaggaag atgggagggt 3361 gctcatcacc cccccagcat aatgatcagc ctccttccta gagacagact catgcagatt 3421 gagatcaaaa gtccctctgc ttgggatcaa attaatgttt gacagagctg aaaaaaaaaa 3481 aaaaaaaaaa aaaaaaaaaa aaaaaaa //