LOCUS BC028062 2243 bp mRNA linear HTC 10-JUN-2008
DEFINITION Homo sapiens zinc finger and BTB domain containing 11, mRNA (cDNA
clone IMAGE:5189665), with apparent retained intron.
ACCESSION BC028062
VERSION BC028062.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2243)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2243)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: e Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657702
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2243
/db_xref="H-InvDB:HIT000091473"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5189665"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 727 a 439 c 492 g 585 t
ORIGIN
1 cccgcgcgct ggagaagtgc agttccccct ggttaccaac tcgcccgctt ttccttcgga
61 ctaagggagc cgtcgaagag cgctcgccaa aggcgcagcc gtttctccct acggtgccgc
121 cgctcctcct gcagccgccc gtaggtagcg ggccgttttc ctcacctgtc cctgacaggc
181 gccctcaggg agccgcggtc cgcgatgtca agcgaggaaa gctaccgggc catcctgcgt
241 tacctgacga acgagcgcga gccgtatgcg ccgggcaccg agggcaatgt caagcgtaaa
301 atccgaaaag ctgccgcctg ctacgtggtg cgcggcggga ctctgtatta ccagcggcgg
361 cagcggcacc gcaagacctt cgcggagctg gaggtggtgc tgcagccgga gcgacgccgg
421 gacctcatcg aggcggcgca cctgggtccc ggcggcactc accacacccg gcatcagacc
481 tggcactact tgtccaagac gtactggtgg cgaggtatat tgaagcaagt caaagattac
541 attaaacagt gtagcaaatg ccaggagaaa ctagatcgat cccgtccaat atcagatgtt
601 tcagaaatgt tggaagaatt gggactagac cttgaatctg gagaagaaag taatgaatcg
661 gaagatgacc tgagcaactt tacttcatct ccaactacag catccaagcc tgcaaaaaag
721 aagccagtat ccaaacatga acttgtgttt gtaagtggta ctctccagtc agctttaaga
781 tttgtaacta gtgtactagt atttgcagcc ttggtgactt atttttctca aaccactaag
841 actgcttatt gaataagaca aaatggcagt gtactgtgtt atataagctg aactgcctct
901 tcatttatca taaatgttcc tgttattttt tcagaatgaa cttaataatt acctgttggt
961 ttgttgttaa ttatcctccc tcccttcttt tgtgatgata tattggtaca agtagacaga
1021 tttacatttc tggaagcagt ctctgagttt acgccccaag gtaaaattaa tctggccagg
1081 tctttgtttt tcacctgcat cagtttcata catcatcata tttctgatta gtaagaagag
1141 gcagccagaa gtgagataca gattttcatt aggtgaggta gaatgaacat ggcagaaaat
1201 aggataggac aacatatctt tttatttaaa tacataggta acaaagaaaa tatcaaatta
1261 ttcatacctg gtaaaaggta atatgtaatg tgtcttgttt taaagcttgt taagggtaaa
1321 aaatacaggt aatatgttac tcttgctctc aaacttattt tgacaggttg acaccaaagg
1381 agtggtaaaa cgttcttctc caaaacattg tcaggctgtc ttaaaacagc tgaacgaaca
1441 gagactttcc aaccagttct gtgatgttac tttgttaatt gaaggagaag agtacaaagc
1501 tcataaatct gttttgtcag caaatagcga gtattttcga gatcttttta ttgagaaagg
1561 agctgtttcc agtcatgagg ctgtggtgga tctttctggt aagggttttg tattactctt
1621 gctttttgtt tgtaatgaca ttctagaaga gggggatatg tatgtcttcc acacacggac
1681 tttatgccaa agtaagagaa gcccactgac aacagtagac taagctgtac tgaaaaggtt
1741 ctttttagca agatttctgt ggtagagtta tggaaaaggg tgtcatttcc tttcactacg
1801 tcttaagtga gacaattata gcagaaaaag aatttctagg atttaaactg ttaaaaacag
1861 tttgagtgaa atccataagt gcaacaaaat tattacatta aatgaatatg ttatttaaaa
1921 attgattgtt taagctaggt gtggtggtgc ccgcctgtag tcccacctac ttgggaggct
1981 gggatgtgag gatctgctta aggtcaggag ttccaggctg tggtgtgtca ttgtacctgt
2041 gaatacccac tgctctccag acggggcaat ataacaagac cctgcctcta aaaataaaaa
2101 gcaaataaaa attgaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaa
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