LOCUS BC028031 2739 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear receptor subfamily 2, group E, member 1, mRNA
(cDNA clone MGC:39998 IMAGE:5242079), complete cds.
ACCESSION BC028031
VERSION BC028031.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2739)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2739)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361108.
FEATURES Location/Qualifiers
source 1..2739
/db_xref="H-InvDB:HIT000040409"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39998 IMAGE:5242079"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2739
/gene="NR2E1"
/gene_synonym="TLL"
/gene_synonym="XTLL"
/db_xref="GeneID:7101"
/db_xref="HGNC:HGNC:7973"
/db_xref="MIM:603849"
CDS 206..1363
/gene="NR2E1"
/gene_synonym="TLL"
/gene_synonym="XTLL"
/codon_start=1
/product="nuclear receptor subfamily 2, group E, member 1"
/protein_id="AAH28031.1"
/db_xref="GeneID:7101"
/db_xref="HGNC:HGNC:7973"
/db_xref="MIM:603849"
/translation="MSKPAGSTSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSI
RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQ
VALYFRGHKEENGAAAHFPSAALPAPAFFTAVTQLEPHGLELAAVSTTPERQTLVSLA
QPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLL
EDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKLNKIISEIQALQEVVARFR
QLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYP
TQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYKSSDI"
BASE COUNT 796 a 653 c 642 g 648 t
ORIGIN
1 cttaaggatg cttaaatttc cactgttgga cgaattctga gcgcccaggg agcagcgcag
61 cgcgcgactg acacccacct gtcccgccca ggagccttgc aggctggagg gcggctggag
121 agcggcggcg cccggcggcg aggcgggcgc tgccggccgg gactcgggca gcgcccacca
181 accgctccgc cccgggacag ccagcatgag caagccagcc ggatcaacaa gccgcatttt
241 agatatcccc tgcaaagtgt gtggcgaccg cagctcgggg aagcactacg gggtctacgc
301 ctgcgacggc tgctcaggtt ttttcaaacg gagcatccga aggaatagga cctatgtctg
361 caaatctgga aaccagggag gctgtccggt ggacaagacg cacagaaacc agtgcagggc
421 gtgtcggctg aagaagtgtt tggaagtcaa catgaacaaa gacgccgtgc agcacgagcg
481 ggggcctcgg acgtccacca tccgcaagca agtggccctc tacttccgtg gacacaagga
541 ggagaacggg gccgccgcgc actttccctc ggcggcgctc cctgcgccgg ccttcttcac
601 cgcggtcacg cagctggagc cgcacggcct ggagctggcc gcggtgtcca ccactccaga
661 gcggcagacc ctcgtgagcc tggctcagcc cacgcccaag tacccccatg aagtgaatgg
721 gaccccaatg tatctctatg aagtggccac ggagtcggtg tgtgaatcag ctgccagact
781 tctcttcatg agcatcaagt gggctaagag tgtgccagcc ttctccacgc tgtctttgca
841 agaccagctg atgcttttgg aagatgcttg gagagaactg tttgttctag gaatagcaca
901 atgggccatt ccggttgatg ctaacactct actggctgta tctggcatga acggtgacaa
961 cacagattcc cagaagctga acaagatcat atctgaaata caggctttac aagaggtggt
1021 ggctcgattt agacaactcc ggttagatgc tactgaattt gcctgtctaa aatgcatcgt
1081 cactttcaaa gccgttccta cacatagtgg ttctgaactg agaagtttcc ggaatgctgc
1141 cgccattgca gcccttcaag atgaggctca gctaacgctc aacagctaca tccataccag
1201 atatcccact caaccctgtc gctttggaaa actcctgttg cttttgccag ctttacgttc
1261 tattagccca tcaactatag aagaagtgtt tttcaaaaaa accatcggca atgtgccaat
1321 tacaagactg ctttcagata tgtacaaatc cagtgatatc taagctcaca agatacccac
1381 ttttcaggat gggacagtat cagatgaact tcaacccatg gagaacaagc ctcaactaac
1441 aaacccttca ggaagcatat accggggaat gtgtagcctt caggaaaaaa atgccaattg
1501 acacaaagca ttccagtagc tatgacctgc cgccctgacc aggatagggc gggtgggaag
1561 gagaggggtg caacaggacc gcctgcactg aaaactcact gctgccatgc cctgggaggg
1621 ggcaaactgg gggttgccac aggccgtgcc attctgcctc ttacctggaa gatcaggctg
1681 aacgatcaaa agctgaaaca taagtagtgc tttctcttcc tttttagcat acaaagtttg
1741 gtaaccaaat atagctctgt gtataacatc gtactgcggc cttcaaaact acgttatgtt
1801 ggagcattta ttttaaaaat aatggtaggt tttaaattaa aagtgttatc aaaagtttcc
1861 cctctattgt aatacattat taagtggcct tcagaactga gttaataagt gaaaagtagc
1921 ttatgccatg tgatttgctt tttctctatc ttcttttttc ttttctttct ctttcttttg
1981 ttctttcttc ttctttttta ataccatagg ccaggcaacc ttgtcaaagg aattgatgga
2041 caaaatgaga ttctcaccag gacttcaggt tggataacat gtcaaaaaga gaagagcttt
2101 actaaaagaa cataagtcaa gggaggatga ataaaaacag caaaaccaaa taaagtggag
2161 atgagtgatt gagtgaggta gattgctgtc ccgttaacat agtgctgaaa ccaaaggcag
2221 tgggggtcca aactcgtggt gcagcaagtc acaccagaca ggaaacgaat atggacgtaa
2281 ttgcagaagg aacttcaagg agatgaatga atgctaaaag ggttcttgac tgatccattg
2341 ctaacagcct gagactcttc aatgcctttc cgaaaactgg tttctagtaa agccttgaat
2401 gaacacacac acacacacac acacacacac acacacacac acacacacac accgtcctac
2461 actttaagct gctcctttgg tatgactcta tacttatgga aatgtagaaa caaacatttt
2521 taaatagctg ctgtactttt cacattttga tttattaggt actagcactg aggaaaaaaa
2581 attcagcact tggactatca taggatgagt aaaacttttc ttgtacaaag tgaattaact
2641 gatttgtgaa gttaaaaggt tgtactcatt gtatttacaa agaataaaaa tatattgaat
2701 ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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