LOCUS BC028008 3259 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5212954, containing frame-shift
errors.
ACCESSION BC028008
VERSION BC028008.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3259)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3259)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: g Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..3259
/db_xref="H-InvDB:HIT000091443"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5212954"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 982 a 732 c 746 g 799 t
ORIGIN
1 ccggcgggag ggccgggagg agggccggcg ggcaggcggc ggcggccact ggccaggcgt
61 ggacgcgcgc ggggccgccg cgggcacgga gtggccgccg cgtcgcctga gcccagagcc
121 cgggagtgct ctcggccgcc gcgtctcctg ccctctgtcc ttccaaccca gccctcggct
181 gagccgcgcc gcaccatgcc cgccgtggac aagctcctgc tagaggaggc gttgcaggac
241 agcccccaga ctcgctcctt actgagcgtg tttgaagaag atgctggcac cctcacagac
301 tataccaacc agctgctcca ggcaatgcag cgcgtctatg gagcccagaa tgagatgtgc
361 ctggccacac aacagctttc taagcaactg ctggcatatg aaaaacagaa ctttgctctt
421 ggcaaaggtg atgaagaagt aatttcaaca ctccactatt tttccaaagt ggtggatgag
481 cttaatcttc tccatacaga gctggctaaa cagttggcag acacaatggt tctacctatc
541 atacaattcc gagaaaagga tctcacagaa gtaagcactt taaaggatct atttggactc
601 gctagcaatg agcatgacct ctcaatggca aaatacagca ggctgcctaa gaaaaaggag
661 aatgagaagg tgaagaccga agtcggaaaa gaggtggccg cggcccggcg gaagcagcac
721 ctctcctccc ttcagtacta ctgtgccctc aacgcgctgc agtacagaaa gcaaatggcc
781 atgatggagc ccatgatagg ctttgcccat ggacagatta acttttttaa gaagggagca
841 gagatgtttt ccaaacgtat ggacagcttt ttatcctccg ttgcagacat ggttcaaagg
901 tagaactgga agccgaggcg gaaaagatgc gggtgtccca gcaagaatta ctttctgttg
961 atgaatctgt ttacactcca gactctgatg tggccgcacc acagatcaac aggaacctca
1021 tccagaaggc tggttacctt aatcttagaa acaaaacagg gctggtcacc accacctggg
1081 agaggcttta tttcttcacc caaggcggga atctcatgtg tcagcccagg ggagccgtgg
1141 ctggaggttt gatccaggac ctggacaact gctcagtgat ggccgtggat tgcgaagacc
1201 ggcgctactg cttccagatc accacgccca atggaaaatc gggaataatc ctccaggctg
1261 agagcagaaa ggaaaatgaa gagtggatat gtgcaataaa caacatctcc agacagatct
1321 acctgaccga caaccctgag gcagtcgcga tcaagttgaa tcagaccgct ctgcaagcag
1381 tgactcccat tacaagtttt ggaaaaaaac aagaaagctc atgccccagc cagaacctga
1441 aaaattcaga gatggaaaat gaaaatgaca agattgttcc caaagcaaca gccagtctac
1501 ctgaagcaga ggagctgatc gcgcctggaa cgccgattca attcgatatt gtgcttcctg
1561 ctacagaatt ccttgatcag aacagaggga gcaggcgtac caaccctttt ggtgaaactg
1621 aggatgaatc atttccagaa gcagaagatt ctcttttgca gcagatgttt atagttcggt
1681 ttttgggatc aatggcagtt aaaacagaca gcactactga agtgatttat gaagcgatga
1741 gacaagtatt ggctgctcgg gctattcata acatcttccg catgacagaa tcccatctga
1801 tggtcaccag tcaatctttg aggttgatag atccacagac tcaagtatca agggccaatt
1861 ttgaacttac cagtgtcaca caatttgctg ctcatcaaga aaacaagaga ctggttggtt
1921 ttgtcatccg tgttcctgaa tccactggag aagaatctct gagtacatac atttttgaaa
1981 gcaactcaga aggcgaaaag atatgttatg ctattaattt gggaaaagaa attattgagg
2041 ttcagaagga tccagaagca ctggctcaat taatgctgtc cataccacta accaatgacg
2101 gaaaatatgt actgttaaac gatcaaccag atgacgatga tggaaatcca aacgaacata
2161 gaggcgcaga atccgaagca taactcactt gcgcctgtgg gggaagagca aacaggaagg
2221 agagctacct cctaagggtt ttaacgtctc tgacatacag gcacactgac ctgatttccg
2281 aaggctgaca atcgtttgtg gaatgtaatc ttgatgcctt gatactgaga cttgggaggg
2341 aaactaagaa atggttgaca gcgttcccac ccatctacaa tgttatttta ggtgctttgt
2401 ggtaagtctt ttttcttaga ttgcgctaaa atttcttaga ttgttcagcg ctcagaacaa
2461 aagtttgaaa aatgcattgt tcatatgaat gtcatctctt ttcagtttcc agtatccttt
2521 ttaaaaaatg gcaaaagcct agatttacaa tttgatgaac actaaatatt tcttattaat
2581 ataatctatt tttgtatttt acttaatgag ctttaagtgc ctgtcgttct gaaaattgtg
2641 tatttataat tcagcttatc tcataattgg acctaatagc atttctttgt gcagttaggt
2701 gatgagcact gctttgaggc ccaagcacta gtagagatgc gcgatacagg tctagtttcg
2761 gtaactgttc cagacatcaa gcaataaaaa aatgaatacc acaaaagatg tttgatttta
2821 cagtggagcc ttactgaacc agcattcaga agtttaaggt cctcctaggt atgagtattt
2881 ttagtagtgg atcactgtgg acagggtgca gctctaccag ttcctgtttc ttctgagcca
2941 gaccctcttc agggaaggga ccaattaatt ttaaaactca cttgaagcac agctggtcat
3001 ggggcttggt ataaagttcc tatttccacc ctgatacttc caattcctgg aaccccagcc
3061 cactccccca tccctcctcc ctatcaaact agtataatga ttttgaatcg gtacagtgtg
3121 tttaactgta actaagttca acagactatt attatctttg taataaatta acctagcaat
3181 aaaaattatt ctgtttcttt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3241 aaaaaaaaaa aaaaaaaaa
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