LOCUS BC027987 2425 bp mRNA linear HTC 26-JUL-2018
DEFINITION Homo sapiens retinal G protein coupled receptor, mRNA (cDNA clone
IMAGE:4944966), with apparent retained intron.
ACCESSION BC027987
VERSION BC027987.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2425)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2425)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 2425)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (26-JUL-2018) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Jul 26, 2018 this sequence version replaced BC027987.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361328
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2425
/db_xref="H-InvDB:HIT000091431"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4944966"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 573 a 649 c 624 g 579 t
ORIGIN
1 gtggatggca gagaccagtg ccttgcccac cggcttcggg gagctcgagg tgctggctgt
61 ggggatggtg ctactggtgg aagaccccgg agctgcggac tccctgccac ctactggtgc
121 tgagcttggc tcttgcggac agtgggatca gcctgaatgc cctcgttgca gccacatcca
181 gccttctccg gtaccagccc cctccccagt ccacaggctc tggggtcctg cctggggcct
241 gacccctggg ccctgggcag ccaggccaag ggcattttta ctacttacag aaaattggcc
301 aagggcagag ggtgggcagg ctaaaatggg ctgaattcca gattgattct gaagaacgac
361 agctgatttc tggaagacag gggttgctga aacctgatga aagagatggt aggctgtaga
421 gatcaatggt gtgggttctg taaccaagca acctaggttt gcattctggc ttcagcattt
481 ctagttctgg gcttcttcca taaatcggat attatttcct aactcatata ggtggttgga
541 agtatttact tctattatgt gtaaataact taaaataatg cttgatacct aggactctac
601 gtaagtgttt gtgaacacaa atgggggcgt tatcaccact actgcacccg tatgtatctg
661 ggctcctgga gtggagggac accgatgcag tgtggagagg ataagaggca gggaggggca
721 gtcataacta gctagtgtct aatacctcct tatacaaaaa ccagggtctt ccatcacagc
781 ttcagaaggt gtttataaaa ttgttttctg aagcagactg gacattctca ttctggtttt
841 ggacactaca gacggaggct ggagcccccc cggatgtgca tgctcagtgc tgaccagcct
901 ggggggtctg catcagtgag aactcttcct cccacagaga attgaagttt ccacctttgc
961 ttgccctttt aggctgggga ggcctgggat ctcccctctg actttgcctt catcttctgt
1021 gtgaccttgg cttcagtatc tttgcctctt tgaatgtcag tttccccacc tatcaaatac
1081 aggcatgagc tctcctgtga cagagggatc tgatcacgca gagagagcct atggcccaac
1141 catggtgcag tcaaagtcac ccagcctgga gagtgtgcat tgggctccac cccttcagcc
1201 cagttacttg agctccaacg cctcatagga aagacaccaa tattaaggcc ctcttcagag
1261 aagaagggca gcattcagga acacacactc caagctgtac ttggcaggtg tgggaggtgg
1321 aaaggatcgg aggagaggtc actggtgccc agtgtctccc acaggcgctg gccctacggc
1381 tcggacggct gccaggctca cggcttccag ggctttgtga cagcgttggc cagcatctgc
1441 agcagtgcag ccatcgcatg ggggcgttat caccactact gcacccgtag ccagctggcc
1501 tggaactcag ccgtctctct ggtgctcttc gtgtggctgt cttctgcctt ctgggcagct
1561 ctgccccttc tgggttgggg tcactatgac tatgagccac tggggacatg ctgcaccctg
1621 gactactcca agggggacag aaacttcacc agcttcctct tcaccatgtc cttcttcaac
1681 ttcgccatgc ccctcttcat cacgatcact tcctacagtc tcatggagca gaaactgggg
1741 aagagtggcc atctccaggt gcccgccctc attgccaaaa tggtgcccac gatcaatgcc
1801 atcaactatg ccctgggcaa tgagatggtc tgcaggggaa tctggcagtg cctctcaccg
1861 cagaagaggg agaaggaccg aaccaagtga gcctgccacc ctggagtgag ccccaggcca
1921 ggaggctgtt ccaggagtcc tgcccagcag cctcggtggc caagcccaga cactcaccca
1981 ccttccccag tggccccgtg gatcctggtc ctaggctgga cacaggattc agaaagacac
2041 caggctgcac agaaagagcc agatggacct gagtgtcggt cacagccccc tacactcaag
2101 gctgagaggc ctcaggaaag tcattccttt ttaaaaataa taataaatgt aagggggtac
2161 agtgcagttt tgttacatgg atagattgcc tagtggtgaa gtctgggctt ttagtgtaac
2221 catcacccta ataatatacg ttgtacccat taagttattt ctcatccctc accccctccc
2281 accttgtcac ccttctgagt ctccaatgtc tattattcca cactccatgt ccacgtgtac
2341 acattattta gctcccactt acaagtgaga acatgtggta tttgactttc aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaa
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