LOCUS BC027986 1250 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 17 open reading frame 45, mRNA (cDNA clone
MGC:40157 IMAGE:4940349), complete cds.
ACCESSION BC027986
VERSION BC027986.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1250)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1250)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748758.
FEATURES Location/Qualifiers
source 1..1250
/db_xref="H-InvDB:HIT000040394"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40157 IMAGE:4940349"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1250
/gene="C17orf45"
/gene_synonym="MGC40157"
/db_xref="GeneID:125144"
/db_xref="HGNC:HGNC:28619"
CDS 106..498
/gene="C17orf45"
/gene_synonym="MGC40157"
/codon_start=1
/product="chromosome 17 open reading frame 45"
/protein_id="AAH27986.1"
/db_xref="GeneID:125144"
/db_xref="HGNC:HGNC:28619"
/translation="MFPGSLSRGRRAAVEMAWLPGSCARVAFAAGAAARYWTAWQGSA
GPNPAAVAEAHGSLFCGRATSARAWSLRRPGPGSPAHSGGVQTRENWIAYPLQSAEDG
VATRLQIREESASCLAAEYWSQEPAMRF"
BASE COUNT 310 a 279 c 337 g 324 t
ORIGIN
1 ccacgcgtcc gcgttgttat ggaggtaggc tctctaggaa tctgggagta gtagctgggg
61 ggcaagagca aataaagagc tcgagcttct gtggtctctg gggagatgtt cccgggaagc
121 ctgtctagag ggcggagggc agctgttgag atggcgtggc tccccggctc ctgcgcccgc
181 gtggctttcg cggcgggcgc tgcggcccgg tattggacag cctggcaggg cagcgcgggg
241 ccgaatccgg ctgccgtggc tgaggctcat ggatcactct tttgtggtag ggccacatct
301 gccagagcct ggagtctgcg aaggccggga cccggttccc cggcccacag tgggggtgtg
361 caaacccgag agaactggat tgcgtaccca ctgcagagtg ctgaagacgg ggtagccacg
421 aggttgcaaa ttcgtgaaga atcagcatca tgtttggcag ctgagtattg gagccaggag
481 cctgccatga ggttttgaga acagagtgct gttttagagc tggcagcagc atctcagccc
541 aagagaaggt tatattccca gaggatgtca gtcccaagga ccagtagctg ccatcagttt
601 ggattctgaa aactaactgg catcaacact gggtgtagaa acatgcttgc cttatgtatc
661 agaggacatg ctcagcagat ccaagagata tatttggcaa ctttttctag aaaaggcaca
721 ttgggtatca ttcattacat tcttgagttt ttttgggttt tttttttttt tttttgagac
781 agtcttgctg tattgcccag gctggagtgt ggtggcacaa tcacagctca ttgcatcctc
841 aatcacccag gcctaagcaa tcctcccacc ttgtagctgg gactacagct cacagcacac
901 ctggctaaaa tttttttttt gttgagacgg attctctatg ttgcccaggc tggtctcagg
961 ctcctgggct cagatggtcc tcctgcctca gcttccaaag gcacaggcca agttgtagct
1021 ttgtcccttg ccatcatgcc caacaagagg ttctatacct tttaatgaat tgactttcat
1081 aaattggtta tgttggtggg caagttcttt aagctggaaa ttgtaaattc ctcctgaaat
1141 gttttttcat gcagttacca tgaactaata ctacaataaa ggatggtctt gggtgtcaat
1201 tcttgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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