LOCUS BC027977 556 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens apolipoprotein C-III, mRNA (cDNA clone MGC:34519 IMAGE:5229117), complete cds. ACCESSION BC027977 VERSION BC027977.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 556) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 556) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 49 Row: p Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557322. FEATURES Location/Qualifiers source 1..556 /db_xref="H-InvDB:HIT000040390" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34519 IMAGE:5229117" /tissue_type="Pancreas, Spleen, adult pooled" /clone_lib="NIH_MGC_120" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..556 /gene="APOC3" /gene_synonym="APOCIII" /db_xref="GeneID:345" /db_xref="HGNC:HGNC:610" /db_xref="MIM:107720" CDS 45..344 /gene="APOC3" /gene_synonym="APOCIII" /codon_start=1 /product="apolipoprotein C-III" /protein_id="AAH27977.1" /db_xref="GeneID:345" /db_xref="HGNC:HGNC:610" /db_xref="MIM:107720" /translation="MQPRVLLVVALLALLASARASEAEDASLLSFMQGYMKHATKTAK DALSSVQESQVAQQARGWVTDGFSSLKDYWSTVKDKFSEFWDLDPEVRPTSAVAA" BASE COUNT 131 a 174 c 139 g 112 t ORIGIN 1 ctcagttcat ccctagaggc agctgctcca ggaacagagg tgccatgcag ccccgggtac 61 tccttgttgt tgccctcctg gcgctcctgg cctctgcccg agcttcagag gccgaggatg 121 cctcccttct cagcttcatg cagggttaca tgaagcacgc caccaagacc gccaaggatg 181 cactgagcag cgtgcaggag tcccaggtgg cccagcaggc caggggctgg gtgaccgatg 241 gcttcagttc cctgaaagac tactggagca ccgttaagga caagttctct gagttctggg 301 atttggaccc tgaggtcaga ccaacttcag ccgtggctgc ctgagacctc aataccccaa 361 gtccacctgc ctatccatcc tgccagctcc ttgggtcctg caatctccag ggctgcccct 421 gtaggttgct taaaagggac agtattctca gtgctctcct accccacctc atgcctggcc 481 ccctccaggc atgctggcct cccaataaag ctggacaaga agctgctatg aaaaaaaaaa 541 aaaaaaaaaa aaaaaa //