LOCUS BC027952 2919 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-C motif) ligand 22, mRNA (cDNA clone
MGC:34554 IMAGE:5220453), complete cds.
ACCESSION BC027952
VERSION BC027952.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2919)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2919)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538803.
FEATURES Location/Qualifiers
source 1..2919
/db_xref="H-InvDB:HIT000040373"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34554 IMAGE:5220453"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2919
/gene="CCL22"
/gene_synonym="A-152E5.1"
/gene_synonym="ABCD-1"
/gene_synonym="DC/B-CK"
/gene_synonym="MDC"
/gene_synonym="MGC34554"
/gene_synonym="STCP-1"
/db_xref="GeneID:6367"
/db_xref="HGNC:HGNC:10621"
/db_xref="MIM:602957"
CDS 12..293
/gene="CCL22"
/gene_synonym="A-152E5.1"
/gene_synonym="ABCD-1"
/gene_synonym="DC/B-CK"
/gene_synonym="MDC"
/gene_synonym="MGC34554"
/gene_synonym="STCP-1"
/codon_start=1
/product="chemokine (C-C motif) ligand 22"
/protein_id="AAH27952.1"
/db_xref="GeneID:6367"
/db_xref="HGNC:HGNC:10621"
/db_xref="MIM:602957"
/translation="MARLQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYR
LPLRVVKHFYWTSDSCPRPGVVLLTFRDKEICADPRVPWVKMILNKLSQ"
BASE COUNT 608 a 860 c 667 g 784 t
ORIGIN
1 caggacagag catggctcgc ctacagactg cactcctggt tgtcctcgtc ctccttgctg
61 tggcgcttca agcaactgag gcaggcccct acggcgccaa catggaagac agcgtctgct
121 gccgtgatta cgtccgttac cgtctgcccc tgcgcgtggt gaaacacttc tactggacct
181 cagactcctg cccgaggcct ggcgtggtgt tgctaacctt cagggataag gagatctgtg
241 ccgatcccag agtgccctgg gtgaagatga ttctcaataa gctgagccaa tgaagagcct
301 actctgatga ccgtggcctt ggctcctcca ggaaggctca ggagccctac ctccctgcca
361 ttatagctgc tccccgccag aagcctgtgc caactctctg cattccctga tctccatccc
421 tgtggctgtc acccttggtc acctccgtgc tgtcactgcc atctcccccc tgacccctct
481 aacccatcct ctgcctccct ccctgcagtc agagggtcct gttcccatca gcgattcccc
541 tgcttaaacc cttccatgac tccccactgc cctaagctga ggtcagtctc ccaagcctgg
601 catgtggccc tctggatctg ggttccatct ctgtctccag cctgcccact tcccttcatg
661 aatgttgggt tctagctccc tgttctccaa acccatacta cacatcccac ttctgggtct
721 ttgcctggga tgttgctgac actcagaaag tcccaccacc tgcacatgtg tagccccacc
781 agccctccaa ggcattgctc gcccaagcag ctggtaattc catttcatgt attagatgtc
841 ccctggccct ctgtcccctc ttaataaccc tagtcacagt ctccgcagat tcttgggatt
901 tgggggtttt ctcccccacc tctccactag ttggaccaag gtttctagct aagttactct
961 agtctccaag cctctagcat agagcactgc agacaggccc tggctcagaa tcagagccca
1021 gaaagtggct gcagacaaaa tcaataaaac taatgtccct cccctctccc tgccaaaagg
1081 cagttacata tcaatacaga gactcaaggt cactagaaat gggccagctg ggtcaatgtg
1141 aagccccaaa tttgcccaga ttcacctttc ttcccccact cccttttttt tttttttttt
1201 gagatggagt ttcgctcttg tcacccacgc tggagtgcaa tggtgtggtc ttggcttatt
1261 gaagcctctg cctcctgggt tcaagtgatt ctcttgcctc agcctcctga gtagctggga
1321 ttacaggttc ctgctaccac gcccagctaa tttttgtatt tttagtagag acgaggcttc
1381 accatgttgg ccaggctggt ctcgaactcc tgtcctcagg taatccgccc acctcagcct
1441 cccaaagtgc tgggattaca ggcgtgagcc acagtgcctg gcctcttccc tctccccact
1501 ccccccccca actttttttt tttttttatg gcagggtctc actctgtcgc ccaggctgga
1561 gtgcagtggc gtgatctcgg ctcactacaa cctcgacctc ctgggttcaa gtgattctcc
1621 caccccagcc tcccaagtag ctgggattac aggtgtgtgc cactacggct ggctaatttt
1681 tgtattttta gtagagacag gtttcaccat attggccagg ctggtcttga actcctgacc
1741 tcaagtgatc caccttcctt gtgctcccaa agtgctgaga ttacaggcgt gagctatcac
1801 acccagcctc cccctttttt tcctaatagg agactcctgt acctttcttc gttttaccta
1861 tgtgtcgtgt ctgcttacat ttccttctcc cctcaggctt tttttgggtg gtcctccaac
1921 ctccaatacc caggcctggc ctcttcagag taccccccat tccactttcc ctgcctcctt
1981 ccttaaatag ctgacaatca aattcatgct atggtgtgaa agactacctt tgacttggta
2041 ttataagctg gagttatata tgtatttgaa aacagagtaa atacttaaga ggccaaatag
2101 atgaatggaa gaattttagg aactgtgaga gggggacaag gtggagcttt cctggccctg
2161 ggaggaagct ggctgtggta gcgtagcgct ctctctctct gtctgtggca ggaggcaaag
2221 agtagggtgt aattgagtga aggaatcctg ggtagagacc attctcaggt ggttgggcca
2281 ggctaaagac tgggatttgg gtctatctat gcctttctgg ctgatttttg tagagacggg
2341 gttttgccat gttacccagg ctggtctcaa actcctgggc tcaagcgatc ctcctggctc
2401 agcctcccaa agtgctggga ttacaggcgt gagtcactgc gcctggcttc ctcttcctct
2461 tgagaaatat tcttttcata cagcaagtat gggacagcag tgtcccaggt aaaggacata
2521 aatgttacaa gtgtctggtc ctttctgagg gaggctggtg ccgctctgca gggtatttga
2581 acctgtggaa ttggaggagg ccatttcact ccctgaaccc agcctgacaa atcacagtga
2641 gaatgttcac cttataggct tgctgtgggg ctcaggttga aagtgtgggg agtgacactg
2701 cctaggcatc cagctcagtg tcatccaggg cctgtgtccc tcccgaaccc agggtcaacc
2761 tgcctgccac aggcactaga aggacgaatc tgcctactgc ccatgaacgg ggccctcaag
2821 cgtcctggga tctccttctc cctcctgtcc tgtccttgcc cctcaggact gctggaaaat
2881 aaatccttta aaataaaaaa aaaaaaaaaa aaaaaaaaa
//