LOCUS BC027891 781 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens GATA binding protein 6, mRNA (cDNA clone
IMAGE:5223853), partial cds.
ACCESSION BC027891
VERSION BC027891.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 781)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 781)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40288196.
FEATURES Location/Qualifiers
source 1..781
/db_xref="H-InvDB:HIT000091396"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5223853"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>781
/gene="GATA6"
/db_xref="GeneID:2627"
/db_xref="HGNC:HGNC:4174"
/db_xref="MIM:601656"
CDS 266..>781
/gene="GATA6"
/codon_start=1
/product="GATA6 protein"
/protein_id="AAH27891.1"
/db_xref="GeneID:2627"
/db_xref="HGNC:HGNC:4174"
/db_xref="MIM:601656"
/translation="MALTDGGWCLPKRFGAAGADASDSRAFPAREPSTPPSPISSSSS
SCSRGGERGPGGASNCGTPQLDTEAAAGPPARSLLLSSYASHPFGAPHGPSAPGVAGP
GGNLSSWEDLLLFTDLDQAATASKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQGPA
AYDGAPGGFVHS"
BASE COUNT 96 a 304 c 253 g 128 t
ORIGIN
1 ggcacccttc ggcgagcgct gtttgtttag ggctcggtga gtccaatcag gagcccaggc
61 tgcagttttc cggcagagca gtaagaggcg cctcctctct cctttttatt caccagcagc
121 gcggcgcaga ccccggactc gcgctcgccc gctggcgccc tcggcttctc tccgcgcctg
181 ggagcaccct ccgccgcggc cgttctccat gcgcagcgcc cgcccgagga gctagacgtc
241 agcttggagc ggcgccggac cgtggatggc cttgactgac ggcggctggt gcttgccgaa
301 gcgcttcggg gccgcgggtg cggacgccag cgactccaga gcctttccag cgcgggagcc
361 ctccacgccg ccttccccca tctcttcctc gtcctcctcc tgctcccggg gcggagagcg
421 gggccccggc ggcgccagca actgcgggac gcctcagctc gacacggagg cggcggccgg
481 acccccggcc cgctcgctgc tgctcagttc ctacgcttcg catcccttcg gggctcccca
541 cggaccttcg gcgcctgggg tcgcgggccc cgggggcaac ctgtcgagct gggaggactt
601 gctgctgttc actgacctcg accaagccgc gaccgccagc aagctgctgt ggtccagccg
661 cggcgccaag ctgagcccct tcgcacccga gcagccggag gagatgtacc agaccctcgc
721 cgctctctcc agccagggtc cggccgccta cgacggcgcg cccggcggct tcgtgcactc
781 t
//