LOCUS BC027684 1240 bp mRNA linear HTC 27-OCT-2008 DEFINITION Mus musculus chemokine-like factor, mRNA (cDNA clone IMAGE:1346032), with apparent retained intron. ACCESSION BC027684 VERSION BC027684.1 KEYWORDS HTC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1240) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1240) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Marcello Bento Soares, Ph.D. cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 66 Row: o Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21746174 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1240 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="taxon:10090" /clone="IMAGE:1346032" /tissue_type="Thymus gland, mouse" /clone_lib="Soares_thymus_2NbMT" /lab_host="DH10B" /note="Vector: pT7T3-Pac" BASE COUNT 370 a 273 c 254 g 343 t ORIGIN 1 cgcgagtcct ggaaagagcc attaatcgag aaggcttgaa agagaggcgt gactgttggg 61 tctgtgggca agatggagac tccacggccg gtcgtaagcc gtcggccctt ctgctgtact 121 ctgaaatgct ttgtgaagtt cctgcggttg gtggtaactg tgacatctat gatctttttc 181 atcgtgggac aagcccctga accatatatc gtcatcactg ggtttgaagt caccgttatt 241 ttctgtttcc tagtcttata cacgtgtgga cttgacaaga taatgagatc tttcttttgg 301 cctttgcttg taagtgatga acttcaacct taaaccttaa ctacctttcc tgccttagga 361 agacacctta gtcaactact tggatctcct aaatatttaa ggtgatctct gctcactgct 421 aatcaatcca agcttggggg atgctctcag ggattcagga tacccacaga acataaattc 481 tctttattgt ttgtaccagt aggtatggct gacctttcca tttgaagaat tctcttaagt 541 atgaatgtcc taaagaaatt tagatttaga gccatgaacc atgttaataa attagagcat 601 gtttttaact tttggccccc ccccacttct ttctgctttt tttcttttat taaaaataag 661 ccgggcgtgg tggtgcacgt ctttaattcc agcactcggg aggcagaggc aggcagattt 721 ctgagttcga ggccagcctg gtctacagag tgagttccag gacagccagg gctacacaga 781 gaaaccctgt ctcaaaaaac aaaaaaagaa aaaaacaaaa gaaagatcct tttctcatac 841 aatatattct gattatagtt tcttcttcct ctgctgctcc gagttcttcc ctaactcccc 901 tccttctgga ttcactctgt ttctgtctct cattagaaaa gaatacactt ctaagagata 961 acaaccaagc atgacaaaat aaatataata agtggaagca aaagctatca tattgaaatt 1021 ggacatgaca actcaacggg aggaaaagag tcccaagagc aggcacacga gtcaagagac 1081 ccactcacac catcgaggac gcttgcacca tcaactgttc cagtggctac cacagctgtc 1141 aaaacagaca aatggaaatc atcgggtgag gtctaggtgg cccttcagca agagattgca 1201 aagttagttc tagaaaaaaa caaaaacaaa aaaaaaaaaa //