LOCUS BC027607 1400 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens zinc finger CCCH-type containing 14, mRNA (cDNA clone
IMAGE:4828241), complete cds.
ACCESSION BC027607
VERSION BC027607.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1400)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1400)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC027607.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: d Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50541966
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1400
/db_xref="H-InvDB:HIT000040286"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4828241"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1400
/gene="ZC3H14"
/gene_synonym="FLJ11806"
/gene_synonym="MGC26892"
/gene_synonym="NY-REN-37"
/gene_synonym="UKp68"
/db_xref="GeneID:79882"
/db_xref="HGNC:HGNC:20509"
CDS 328..1248
/gene="ZC3H14"
/gene_synonym="FLJ11806"
/gene_synonym="MGC26892"
/gene_synonym="NY-REN-37"
/gene_synonym="UKp68"
/codon_start=1
/product="zinc finger CCCH-type containing 14"
/protein_id="AAH27607.1"
/db_xref="GeneID:79882"
/db_xref="HGNC:HGNC:20509"
/translation="MRMSSKFPSPPLPIFLPPEPVDLGSITSSSCSLNELDNISHLLR
KISADINEIKGMKAAILTVEANLFDLNVRVSKNEAKISSLEVKMNEYSTTYECNRQFE
DQEEDTESQSRTTDVKIIGFLRNVEKGTQQRQLLSRLQIDPVMAETLQMSQAEMSELS
VAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKC
TKPDCPFTHVSRRIPVLSPKPVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQ
CTRPDCTFYHPTINVPPRHALKWIRPQTSE"
BASE COUNT 454 a 281 c 263 g 402 t
ORIGIN
1 ggttttactg gaagaggagc tatacagatg gtacttagag gatgtagggc cctacgtatt
61 agggcttctt agttgtagcg aagagcaatg gtctggtacg tttagctttt tcacatttag
121 ttttgaattc tgactctaga aatgtacaac cccatctttt gaattacagg ttttaagatg
181 ttatttgctc ttaatacgtc ttaaggtaac agccttgatc actgctttta ctttcgatga
241 aataacttaa tgagctgtga agaaaaaatt atcagatttt aagggagaga attttatgaa
301 aatgtctttg aggttcctgt cacctttatg agaatgtctt caaagtttcc atcaccacct
361 ctaccaattt ttcttccacc ggagccagtg gacttaggtt ccataacaag ctcctcttgt
421 tcactgaatg agctagacaa tatttcccac cttttaagga aaatatcagc tgatatcaat
481 gaaattaaag gaatgaaagc agctattttg acagtggaag caaatctttt tgatctaaat
541 gttagagtgt ccaagaatga agcaaaaatt tcatctttgg aggttaaaat gaatgaatat
601 tcaacaacat atgaatgcaa cagacagttt gaagatcaag aagaagatac tgaatcacag
661 tcaagaacta ctgatgtaaa aataatcggc ttccttagaa acgttgagaa aggaactcaa
721 cagaggcaat tattatcccg actgcaaatc gacccagtaa tggcagaaac tctgcagatg
781 agtcaagctg agatgagtga actgagtgtg gcacagaaac cagaaaaact tttggagcgc
841 tgcaagtact ggcctgcttg taaaaatggg gatgagtgtg cctaccatca ccccatctca
901 ccctgcaaag ccttccccaa ttgtaaattt gctgaaaaat gtttgtttgt tcacccaaat
961 tgtaaatatg atgcaaagtg tactaaacca gattgtccct tcactcatgt gagtagaaga
1021 attccagtac tgtctccaaa accagttgca ccaccagcac caccttccag tagtcagctc
1081 tgccgttact tccctgcttg taagaagatg gaatgtccct tctatcatcc aaaacattgt
1141 aggtttaaca ctcaatgtac aagaccggac tgcacattct accatcccac cattaatgtc
1201 ccaccacgac atgccttgaa atggattcga cctcaaacca gcgaatagca cccagtcctg
1261 cctggcagaa gatcatgcag tttggaagtt ttcatgtact gatgaaagat actctacaga
1321 acttgtcaaa tctttgaaac ttggaatata ttgctttcat aatatgaagt tttattgcct
1381 atccaaaaaa aaaaaaaaaa
//