LOCUS BC027589 1695 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens leucine rich repeat containing 6, mRNA (cDNA clone
MGC:26154 IMAGE:4831028), complete cds.
ACCESSION BC027589
VERSION BC027589.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1695)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1695)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31621308.
FEATURES Location/Qualifiers
source 1..1695
/db_xref="H-InvDB:HIT000091358"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26154 IMAGE:4831028"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1695
/gene="LRRC6"
/gene_synonym="LRTP"
/gene_synonym="TSLRP"
/db_xref="GeneID:23639"
CDS 71..1306
/gene="LRRC6"
/gene_synonym="LRTP"
/gene_synonym="TSLRP"
/codon_start=1
/product="LRRC6 protein"
/protein_id="AAH27589.1"
/db_xref="GeneID:23639"
/translation="MGWITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCR
DLKILYLQNNLIGKIENVSKLKKLEYLNLALNNIEKIENLEGCEELAKLDLTVNFIGE
LSSIKNLQHNIHLKELFLMGNPCASFDHYREFVVATLPQLKWLDGKEIEPSERIKALQ
DYSVIEPQIREQEKDHCLKRAKLKEEAQRKHQEEDKNEDKRSNAGFDGRWYTDINATL
SSLESKDHLQAPDIEEHNTKKLDNSEDDLEFWNKPCLFTPESRLETLRHMEKQRKKQE
KLSEKKKKVKPPRTLITEDGKALNVNEPKIDFSLKDNEKQIILDLAVYRYMDTSLIDV
DVQPTYVRVMIKGKLVLPAEVKPDSSSAKRSQTTGHLVICMPKVGEVITGGQRAFKSM
KTTSDRSREQTNTSYSTGF"
BASE COUNT 601 a 326 c 390 g 378 t
ORIGIN
1 agcggaaggg tgaaaagcgt cattcgaggt ccgggtccgg cttgcggggt cagcgaactg
61 gagaggcgcc atgggctgga tcacagaaga tcttattaga cggaatgctg aacacaacga
121 ctgtgtcatt ttttccctgg aggaactctc gttgcatcag caagaaatag aaagactaga
181 acacattgat aaatggtgcc gggatttaaa aattctctat cttcaaaata atcttattgg
241 gaaaattgaa aatgttagca aactcaagaa acttgaatat ttgaatttag ctttaaacaa
301 cattgaaaaa atagaaaact tggaaggatg tgaagagctg gcaaaacttg acctgactgt
361 gaatttcatt ggagagctga gcagcattaa aaacttgcag cacaatatcc atctgaagga
421 gctctttctc atggggaacc catgtgcttc ctttgaccac tatagggagt tcgtggtagc
481 aactcttcca caattaaagt ggttggatgg taaagaaata gagccttcag aaaggattaa
541 ggcattgcag gactattcag taattgaacc acaaatcaga gagcaggaaa aagatcactg
601 tcttaaacga gccaaactca aggaagaggc tcagaggaaa caccaagaag aggataaaaa
661 tgaagacaag agaagtaacg caggctttga tggacgttgg tacacagaca tcaatgctac
721 tctttcctct ttagagagca aagaccacct acaggcacca gacatagagg aacacaacac
781 aaagaaatta gacaacagtg aagatgactt ggaattctgg aataagccct gtttgtttac
841 tcctgaatca agattggaaa ctcttagaca catggaaaaa caacggaaga aacaggaaaa
901 attaagtgaa aaaaagaaga aagtgaaacc acccaggact ttgatcactg aagatgggaa
961 agccctaaat gtgaatgagc ccaaaattga cttctctttg aaagataacg aaaagcagat
1021 catcctggac cttgctgtct ataggtatat ggatacctct ttaatcgatg ttgatgtgca
1081 accaacttac gtgcgagtaa tgatcaaagg aaagcttgtc cttcctgcag aagtgaaacc
1141 cgatagtagt tctgctaaaa gatctcagac aacgggtcat ttggtcatct gcatgcccaa
1201 ggtaggagaa gtaatcacag gtggtcagcg agcattcaaa tctatgaaaa ctacctcgga
1261 caggagcaga gaacaaacaa atacaagcta ttctactgga ttctagaggt gatgtttctg
1321 acagtcaggt cgtgggtaag accagtgatg ggcgtccgtc ctagaggcct ctgacattaa
1381 ggcggggaaa gcaaagaagc aagcacatgg agaaactaga agtagaccct agcaagcact
1441 cattccctga tgtgactaac atagttcaag agaaaaaaca cacacccaga agacgacctg
1501 aacccaaaat tataccaagt gaggaagacc caacctttga agacaaccct gaagtgcctc
1561 cgctgatttg aaacatctgg ctgcgttgcc attggctgag acccaccagg tccagttttg
1621 gttggtgtag agaccatatg catattattc ctgggataaa cacagagtta tttgtcaaga
1681 aaaaaaaaaa aaaaa
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