LOCUS BC027474 1365 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB27B, member RAS oncogene family, mRNA (cDNA clone
MGC:34424 IMAGE:4520182), complete cds.
ACCESSION BC027474
VERSION BC027474.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1365)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1365)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: c Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314628.
FEATURES Location/Qualifiers
source 1..1365
/db_xref="H-InvDB:HIT000040266"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34424 IMAGE:4520182"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1365
/gene="RAB27B"
/db_xref="GeneID:5874"
/db_xref="HGNC:HGNC:9767"
/db_xref="MIM:603869"
CDS 112..768
/gene="RAB27B"
/codon_start=1
/product="RAB27B, member RAS oncogene family"
/protein_id="AAH27474.1"
/db_xref="GeneID:5874"
/db_xref="HGNC:HGNC:9767"
/db_xref="MIM:603869"
/translation="MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGI
DFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT
SQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYF
ETSAATGQNVEKAVETLLDLIMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC
"
BASE COUNT 497 a 249 c 281 g 338 t
ORIGIN
1 gtggagcccg ggagttccag ggcttgggaa ggggaaggaa acctctctga aatctgacac
61 ctgctctccc ggcaaggaaa cttcgcaggc tgaccgacca agaccatcac tatgaccgat
121 ggagactatg attatctgat caaactcctg gccctcgggg attcaggggt ggggaagaca
181 acatttcttt atagatacac agataataaa ttcaatccca aattcatcac tacagtagga
241 atagactttc gggaaaaacg tgtggtttat aatgcacaag gaccgaatgg atcttcaggg
301 aaagcattta aagtgcatct tcagctttgg gacactgcgg gacaagagcg gttccggagt
361 ctcaccactg catttttcag agacgccatg ggcttcttat taatgtttga cctcaccagt
421 caacagagct tcttaaatgt cagaaactgg atgagccaac tgcaagcaaa tgcttattgt
481 gaaaatccag atatagtatt aattggcaac aaggcagacc taccagatca gagggaagtc
541 aatgaacggc aagctcggga actggctgac aaatatggca taccatattt tgaaacaagt
601 gcagcaactg gacagaatgt ggagaaagct gtagaaaccc ttttggactt aatcatgaag
661 cgaatggaac agtgtgtgga gaagacacaa atccctgata ctgtcaatgg tggaaattct
721 ggaaacttgg atggggaaaa gccaccagag aagaaatgta tctgctagac tctacataga
781 aactgaacat caagaacccc accaaaatat tacttttaaa aacaatgaca aaccacacaa
841 ttgttgttga gtaaaccacg cacaatggca tgtctttctt tttctgccag aaaatctatt
901 ttaagaaacc agaatagtca acagtgttca aaagaattga ctagttatcc ctgaggccct
961 ttcaaacatg atcaaagatt tcccaatgtg atctcatcat catggatact caatttgttt
1021 tttcttatag agaaaatgag tatataagac aatatacaag aagaaatatc agtgagtttt
1081 aaatcagaac aagttacctg tcacattgaa gaaaagggta ggcactaaag ggagaacaca
1141 gaaagaagaa tttctaaaat attggattta cttcttatat tgagtcagat gcatactttt
1201 agatttgcat tggggaaaat gtactagcta aaaatggata cacaatgaag aattctattt
1261 ggctaattaa gaatgatata ctatgtacac ccaataagct gtactagaat gaataaatta
1321 ctgataaggt tccaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//