LOCUS BC027465 1286 bp mRNA linear HUM 01-DEC-2003 DEFINITION Homo sapiens cDNA clone IMAGE:4155919, complete cds. ACCESSION BC027465 VERSION BC027465.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1286) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1286) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 52 Row: a Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1286 /db_xref="H-InvDB:HIT000050917" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4155919" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" CDS 144..308 /codon_start=1 /product="Unknown (protein for IMAGE:4155919)" /protein_id="AAH27465.1" /translation="MAHVDFRPPAYSPAQRSHTYTHGLGLHRRPGAGHCSASPGPAAP TARMPGRLRG" BASE COUNT 270 a 389 c 337 g 290 t ORIGIN 1 gggagggcta gggagggtgt ctgacctggc aggtggaatc agaggggcta caggcctgag 61 gctgcagtga caccccgaga ggagggtcaa aggacaggag agggccacaa gttcaggaaa 121 tggcaaggtc tcaggtgacg aggatggcgc atgtggattt taggcctcca gcctactccc 181 cagcccaacg cagtcacacc tatactcacg gattaggtct ccatcgccga cctggagccg 241 ggcactgctc tgcctctcca ggtcctgcag caccgactgc tcgaatgcca gggcggctac 301 gcggctgaag aatgccttca cgttctcgcc tgtgggccca caagacagcc gggacctcat 361 cagtgtttct ccttgcccct taatgcgtct gggtgtgaaa gccaggccag cctaccctca 421 ggttggcacg tagccctttc tagagcaccc tgacagtaac aatgacccca ggagggcaca 481 gccccaccca ctcacacagg cagcacagtg ccaggggcag ggtccactgg cctggcctcc 541 cacctggctc cagcctcccc actcccaccc cactgcctgc ttgggccact ccctcaaact 601 tctgagcctt tgcttcccag catctactct tccaatcaga tgctactatg gcccaagtgt 661 tggaagatgt ggaactcagg acagatgtgt gcctgccctc ctgtcacttt ccatacctgt 721 ccggtggggc tgtgaggatt gatttgctgt cagcccccac atggagcctt tatgcatcct 781 cctccaggta gaggtggctg cccatcagag agcgggctgg tttccagccc ttaacacgca 841 cactgccctt gtgcagccag caacctgcac aaccgcatag ggcagtcctg cttggtccat 901 agtgagctgt cggtgagctc actgttactc tgataaagga ggaagggttc tcacagagca 961 gttctcactg ttggaaagga gcagtggaag gcactgccag ttgtttgcgc tgggctgaaa 1021 gtggtgcttc tacttgtgac gccaaccctc agtgctcacc cagtctccga ctagatatct 1081 gctgtcccct cttacacagg gtaaagacta ctgggcccaa ttcctgagtc cccagagcct 1141 tgggggccta ttatgtgcca ggccctgcgt atgacttcat ttcatccccc aacaacctgt 1201 gtttgccatc tgctctttgt gtctttggat tttctgtttt cctcagtaaa tacacctggc 1261 ttttgtaatt taaaaaaaaa aaaaaa //