LOCUS BC027459 1103 bp mRNA linear HUM 16-AUG-2007
DEFINITION Homo sapiens phosphatidylinositol-5-phosphate 4-kinase, type II,
beta, mRNA (cDNA clone MGC:34571 IMAGE:3877995), complete cds.
ACCESSION BC027459
VERSION BC027459.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1103)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1103)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: a Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32528304.
FEATURES Location/Qualifiers
source 1..1103
/db_xref="H-InvDB:HIT000040260"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34571 IMAGE:3877995"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1103
/gene="PIP4K2B"
/gene_synonym="PIP5KIIB"
/gene_synonym="PIP5KIIbeta"
/db_xref="GeneID:8396"
/db_xref="HGNC:HGNC:8998"
/db_xref="MIM:603261"
CDS 99..944
/gene="PIP4K2B"
/gene_synonym="PIP5KIIB"
/gene_synonym="PIP5KIIbeta"
/codon_start=1
/product="phosphatidylinositol-5-phosphate 4-kinase, type
II, beta"
/protein_id="AAH27459.1"
/db_xref="GeneID:8396"
/db_xref="HGNC:HGNC:8998"
/db_xref="MIM:603261"
/translation="MSSNCTSTTAVAVAPLSASKTKTKKKHFVCQKVKLFRASEPILS
VLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMV
FRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEM
HNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLK
GSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEEILVLSP
GRRIA"
BASE COUNT 330 a 271 c 299 g 203 t
ORIGIN
1 gcgggggtgg ggatcggtcc gggggaggcc tgaggccgct ggcttgtgcg ctgtctccgc
61 cgcccccctc tttcgccgcc gccgccgccg ccccgggcat gtcgtccaac tgcaccagca
121 ccacggcggt ggcggtggcg ccgctcagcg ccagcaagac caagaccaag aagaagcatt
181 tcgtgtgcca gaaagtgaag ctattccggg ccagcgagcc gatcctcagc gtcctgatgt
241 ggggggtgaa ccacacgatc aatgagctga gcaatgttcc tgttcctgtc atgctaatgc
301 cagatgactt caaagcctac agcaagatca aggtggacaa tcatctcttc aataaggaga
361 acctgcccag ccgctttaag tttaaggagt attgccccat ggtgttccga aaccttcggg
421 agaggtttgg aattgatgat caggattacc agaattcagt gacgcgcagc gcccccatca
481 acagtgacag ccagggtcgg tgtggcacgc gtttcctcac cacctacgac cggcgctttg
541 tcatcaagac tgtgtccagc gaggacgtgg cggagatgca caacatctta aagaaatacc
601 accagtttat agtggagtgt catggcaaca cgcttttgcc acagttcctg ggcatgtacc
661 gcctgaccgt ggatggtgtg gaaacctaca tggtggttac caggaacgtg ttcagccatc
721 ggctcactgt gcatcgcaag tatgacctca agggttctac ggttgccaga gaagcgagcg
781 acaaggagaa ggccaaggac ttgccaacat tcaaagacaa tgacttcctc aatgaagggc
841 agaagctgca tgtgggagag gagagtaaaa agaacttcct ggagaaactg aagcgggacg
901 ttgaggagat tctcgttctg tccccaggca ggagaatcgc ttgaacccag gaggcggagg
961 ttgcggtgac cctccagctt gggcaacatg ttatgaatga aactccatct caaaaaataa
1021 aaaaaaaaaa aggaagcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1081 aaaaaaaaaa aaaaaaaaaa aaa
//