LOCUS       BC027178                1424 bp    mRNA    linear   HUM 18-JAN-2007
DEFINITION  Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S.
            cerevisiae), mRNA (cDNA clone IMAGE:4343048), partial cds.
ACCESSION   BC027178
VERSION     BC027178.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1424)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Lou Staudt
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 26 Row: l Column: 18
            This clone was selected for full length sequencing because it
            passed the following selection criteria: GenomeScan gene
            prediction, Similarity but not identity to protein.
FEATURES             Location/Qualifiers
     source          1..1424
                     /db_xref="H-InvDB:HIT000040246"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4343048"
                     /tissue_type="Lymph, lymphoma"
                     /clone_lib="NIH_MGC_85"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            <1..1424
                     /gene="PRPF40A"
                     /gene_synonym="FBP-11"
                     /gene_synonym="FBP11"
                     /gene_synonym="FLAF1"
                     /gene_synonym="HIP10"
                     /gene_synonym="HYPA"
                     /gene_synonym="NY-REN-6"
                     /db_xref="GeneID:55660"
                     /db_xref="HGNC:HGNC:16463"
     CDS             <1..649
                     /gene="PRPF40A"
                     /gene_synonym="FBP-11"
                     /gene_synonym="FBP11"
                     /gene_synonym="FLAF1"
                     /gene_synonym="HIP10"
                     /gene_synonym="HYPA"
                     /gene_synonym="NY-REN-6"
                     /codon_start=2
                     /product="PRPF40A protein"
                     /protein_id="AAH27178.1"
                     /db_xref="GeneID:55660"
                     /db_xref="HGNC:HGNC:16463"
                     /translation="MKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLE
                     SERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKK
                     RQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRE
                     SEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ"
BASE COUNT          539 a          209 c          277 g          399 t
ORIGIN      
        1 gatgaaacga aaagaatctg catttaagag tatgttaaaa caagctgctc ctccgataga
       61 attggatgct gtctgggaag atatccgtga gagatttgta aaagagccag catttgagga
      121 cataactcta gaatctgaaa gaaaacgaat atttaaagat tttatgcatg tgcttgagca
      181 tgaatgtcag catcatcatt caaagaacaa gaaacattct aagaaatcta aaaaacatca
      241 taggaaacgt tcccgctctc gatcggggtc agattcagat gatgatgata gccattcaaa
      301 gaaaaaaaga cagcgatcag agtctcgttc tgcttcagaa cattcttcta gtgcagagtc
      361 tgagagaagt tataaaaagt caaaaaagca taagaagaaa agtaagaaga ggagacataa
      421 atctgactct ccagaatccg atgctgagcg agagaaggat aaaaaagaaa aagatcggga
      481 aagtgaaaaa gacagaacta gacaaagatc agaatcaaaa cacaaatcgc ctaagaaaaa
      541 gactggaaag gattctggta attgggatac ttctggcagc gaactgagtg aaggggaatt
      601 ggaaaagcgc agaagaaccc ttttggagca actggatgat gatcaataaa ttataccaaa
      661 tatatgttta cagtatgatt taaagtctga ttcagaccag ggactctatt ttaagttcaa
      721 ctgaaataac actgggtttt aattatatca caggaaaaaa aaagtgcatt taagtattgt
      781 tatcgtggac tttataaaag caaaggaaat tgaaagtaac ttttgattct gtatcaagaa
      841 tcatattttc atacagtcat aactgtcttt ctgtgaccct ttcacagggc actgtaggat
      901 ggattaaagg tggcaattta ctgataactg cagatgtctc tactttgttc taaaatctaa
      961 gtcataaggt gatttgattt actttataga agctggattt tgaagatcta atgaaaaatt
     1021 ttttgataat atagtagtac aaaaaaagca ccagcaactg ataaaaattg cttttttgtg
     1081 cgctacccaa ctggttaaag ccaatgtgat cttttatggt gaaactccta agaaacaggt
     1141 ggttttgctg gaaacttggt agacccttaa ttatagtggt gctaatgagc actactgtaa
     1201 tataaagcca ccattatttt ttatcaaaca tctgaataca ttttacaaag gctattgtga
     1261 gggcattatt ttgagcatct attttgaggt gatgtttaaa aaaactttaa catcaaatca
     1321 aattgtaaat taatttaaat atattgcctt aaggacctac taaagaatgt gccaccagac
     1381 tttaagtgat agttgcaata tccttgtcta aaaaaaaaaa aaaa
//