LOCUS BC026914 2593 bp mRNA linear HUM 27-OCT-2008
DEFINITION Homo sapiens trophinin, mRNA (cDNA clone IMAGE:4932728).
ACCESSION BC026914
VERSION BC026914.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2593)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2593)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29540548.
FEATURES Location/Qualifiers
source 1..2593
/db_xref="H-InvDB:HIT000040232"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4932728"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 707 a 675 c 673 g 538 t
ORIGIN
1 gagaggcttg gagagagcag acgccttctg gattcaagaa gacgaggctc acctgttact
61 cggcctccca gaaagatgga taggagaaat gactacggat atagggtgcc tctatttcag
121 ggccctctgc ctcccccggg gagcctgggg cttcccttcc ctccagatat acagactgag
181 accacagaag aggacagtgt cctgctgatg cataccctgt tggcggcaac caaggactcc
241 ctggccatgg acccaccagt tgtcaaccgg cctaagaaaa gcaagaccaa gaaggcccct
301 ataaagacta ttactaaggc tgcacctgct gcccctccag tcccagctgc caatgagatt
361 gccaccaaca agcccaaaat aacttggcag gctttaaacc tgccagtcat tacccagatc
421 agccaggctt tacctaccac tgaggtaacc aatactcagg cttcttcagt cactgctcag
481 cctaagaaag ccaacaagat gaagagagtt actgccaagg cagcccaagg ctcccaatcc
541 ccaactggcc atgagggtgg cactatacag ctgaagtcac ccttgcaggt cctaaagcta
601 ccagtcatct cacagaatat tcacgctcca attgccaatg agtcagccag ttcccaagcc
661 ttgataacct ctatcaagcc taagaaagct tccaaggcta agaaggctgc aaataaggcc
721 atagctagtg ccaccgaggt ctcgctggct gcaactgcca cccatacagc taccacccaa
781 ggccaaatta ccaatgagac agccagtatc cacaccacag cagcctccat ccgaaccaag
841 aaagcctcca aagccaggaa gacaattgct aaggtcataa atactgacac tgagcatata
901 gaggctctaa atgtcactga cgcagctacc aggcagattg aggcctcagt agtggctatc
961 aggcccaaaa aatccaaggg caagaaggct gccagcaggg gcccaaattc tgtctctgag
1021 atctctgagg ccccacttgc cactcagata gtcacaaacc aagccctggc agccaccctg
1081 cgggtcaaga gagggtctag ggctcggaag gctgccacta aggctcgggc aactgaaagc
1141 cagactccaa atgctgacca aggggcccag gccaagatag cctctgctca gaccaacgta
1201 agtgcccttg agactcaggt tgctgctgct gtccaggccc tggcagatga ctatctggct
1261 cagttgagcc tggagcccac aaccaggacc cggggcaaaa gaaaccgaaa gtccaagcat
1321 ctgaatgggg atgagagaag tggcagtaat tacaggcgga tcccatgggg ccggaggcct
1381 gcaccaccgc gagatgtggc cattttacaa gaaagggcta ataagttggt gaaatacctg
1441 ttggttaagg accagacaaa gatccccatc aaacgctcag acatgctgag ggatgtcatc
1501 caagaatatg atgaatattt cccagaaatc attgaacgag caagctacac tctggagaag
1561 atgtttcgag tcaatctgaa agaaattgat aagcaaagta gcttgtatat tctcatcagc
1621 actcaggaat cctctgcagg catactggga acgaccaagg acacacccaa gctgggtctc
1681 ctcatggtga ttctgagtgt catttttatg aatggcaaca aggccagtga ggctgtcatc
1741 tgggaggtgc tgcgcaagtt ggggctgcgc cctggggtga ggcattcact ctttggggaa
1801 gtgaggaagc tcatcacaga cgagtttgtg aagcagaagt acctggagta caagagggtc
1861 cctaacagca gaccacctga atatgagttc ttctggggct tgcgctccta ccacgagact
1921 agcaagatga aagtcctcaa gtttgcatgc agggtgcaga agaaagaccc caaggactgg
1981 gctgtgcagt accgcgaggc agtggagatg gaagtccaag ctgcagctgt ggctgtggct
2041 gaggctgaag ccagggctga gtggttccaa caccagcact ggctttactg gcgaacccag
2101 caccagcacg ggcttcagta gtggacccag ttctattgtt ggcttcagcg gtggaccaag
2161 cactggtgtt ggcttctgca gtggaccaag caccagtggc ttcagcggtg gaccgagcac
2221 aggagctggc ttcggcggtg gaccaaacac tggtgctggc tttggtggtg gaccgagcac
2281 cagtgctggc tttggcagtg gagccgccag tcttggtgcc tgtggcttct cgtatggcta
2341 gtgaggtttc agatttattc cccatgttta cagataccgc taataaattg cagtagtcct
2401 tcccatggag ccaaagtaca tccttggaat ctttgtccac acagcagtca aggcagttat
2461 ggccaatcag ctgagggtgt catgtgatgg aaaaatctgt ttgctgttcc tgctttattg
2521 tttgctttct gtgtgctgtc atattttggt atcagagtta cattaaattt gcaaaatgaa
2581 aaaaaaaaaa aaa
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