LOCUS BC026909 2567 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens chromosome 1 open reading frame 216, mRNA (cDNA clone
MGC:24981 IMAGE:4932944), complete cds.
ACCESSION BC026909
VERSION BC026909.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2567)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2567)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC026909.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: n Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748804.
FEATURES Location/Qualifiers
source 1..2567
/db_xref="H-InvDB:HIT000040231"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24981 IMAGE:4932944"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2567
/gene="C1orf216"
/db_xref="GeneID:127703"
/db_xref="HGNC:HGNC:26800"
CDS 108..797
/gene="C1orf216"
/codon_start=1
/product="chromosome 1 open reading frame 216"
/protein_id="AAH26909.1"
/db_xref="GeneID:127703"
/db_xref="HGNC:HGNC:26800"
/translation="MFAIQPGLAEGGQFLGDPPPGLCQPELQPDSNSNFMASAKDANE
NWHGMPGRVEPILRRSSSESPSDNQAFQAPGSPEEGVRSPPEGAEIPGAEPEKMGGAG
TVCSPLEDNGYASSSLSIDSRSSSPEPACGTPRGPGPPDPLLPSVAQAVQHLQVQERY
KEQEKEKHHVHLVMYRRLALLQWIRGLQHQLIDQQARLQESFDTILDNRKELIRCLQQ
RAAPSRPQDQA"
BASE COUNT 604 a 595 c 764 g 604 t
ORIGIN
1 cgcggagacg cccaggccga ggaaccccca gcccagggac tagacaccac cagggccggg
61 cggagccaga gccagacgcg ccggagcggg cgcctctacg ccgctagatg ttcgccatcc
121 agccagggct agctgagggg ggccaattcc tgggggaccc acctcctgga ttatgtcagc
181 ccgagctcca accagacagc aactccaact tcatggcaag tgccaaggat gctaacgaga
241 attggcatgg gatgccaggc agagtggaac ctatcctgag gaggagctcc tctgagtcac
301 cctctgacaa ccaagccttc caggcccctg gatcccctga ggaaggggtg cgcagccccc
361 cagagggggc agagattccc ggggctgagc ctgagaagat gggtggtgct ggcacagtct
421 gctcccctct ggaggacaac ggctatgcca gcagttccct gagcattgac agccgtagca
481 gcagtcctga gcctgcctgt gggaccccgc gaggccctgg ccctcccgat ccccttctgc
541 cctcagtggc ccaggctgtg cagcacttac aagtccagga gcgctacaaa gagcaggaga
601 aggaaaagca ccacgtgcac ttggtgatgt accgtcgcct ggcactgctc cagtggatcc
661 ggggcctgca gcatcagttg attgaccagc aggcccgact gcaggagagc ttcgacacca
721 tcctagacaa ccggaaggag cttattcgct gtctccagca gagggcagca ccatccaggc
781 cccaggacca ggcctaaggg tgtgcctcca caagtgtgca agggtatatg tatatatttg
841 caggcatgtg tgaggcgcac tagtaagtac ataatttgct ggcatgattg caggtaggca
901 tgagtgtgta tgtgctaaca tgtaggctgg tgtgtgtagg catgtgtgaa taagcatgta
961 taaatgagct taagtgtgct gtgtgcacat gtgtacacac agctaattta tctgcagacc
1021 tatatgtgag catgtaagag tgaacatatg tgtgtgtgtg tagtatgtaa gaatgaggaa
1081 ctcggtatgt gcatgtgtag acaggtaccc agcagtgtgt gtatatgcgc atgagtgagg
1141 atgtataggc agaagatgtg tgtgtctatg agtgagtttg agtgtgcagg cttgtattag
1201 gtgtatgtga ggaagccctt gtgtgtgcag gggtgcacat gtttggccac aggcatggga
1261 ggtgtatgtt aggagcatgt gtgtttgtag gcagactcat gagcaggtgt gtgcaaatac
1321 atatccagct gcactgtggg tgtccaccca caccttgtgt tcctcatggc ctaccccagc
1381 ctttcttctc cactgggtcc cactgttccc tggagacaga gggctagcat gctgtcattt
1441 atctgaaggt tgtggctgac ccattctcct gggatttccc aggccacctc tcctttccct
1501 ttccctcact taacccagac ttgctcagct gaggctattg tccctgatgt tggctttact
1561 tgtaggaggt ttagtggctg ctctggcctg ccatggaatt ttggctgcaa ttttggcagt
1621 gtgtggagaa ctggtatcag gaaagggaac caggagtagt gatgaagatg atggtgggga
1681 tggggacaga ggacataggg gactgtccct cttgaactct gcctttgggc acatgggaga
1741 tggggacagg aaagatgata acagtggaac cctgtgaaga ataggagaat gggaattcta
1801 aaataccagt tcccaaacaa accatctctc cattggaaaa ggagctgttg caaaccgtgt
1861 tcatttaagc ttctgatgaa aagcaatgta tgtttataag cttgcaagta acagacaaga
1921 tgttccaagg ccgatgagga aaatatcgct tccctgtctc tgcctctacc ttgctgtgcc
1981 tctctggctt tagcagcatt ggatgttgaa ttggtttggt tcatttctct gaagtcggac
2041 tgtcaggagg agccagaggt tggctttctg ggatgtgaag gggacagtgt cagcctaagc
2101 ctctggagat gcttaggatg ctgaatttta accccttctt tcactgcatg gcccttcaaa
2161 cagggattgg caggctccgc gagttacaga gtgggtgagt cttggagaga accaacgact
2221 aaggtagctt agctctctgc tttgttcttg ggagccaaga gaatgcaaga tcctggtggg
2281 tgagcagtgg tatgaagagg ggacactggt gggtgaacag tggcatggaa gtcactgatg
2341 cagcctctgg ccctcagtct ccctatcggc aaagtggggg gctcttccta tctctaaaga
2401 gtttcatccc tgacaggtgg atgggtgaaa gatccagaga gtgggggtga ggggtgggcc
2461 ctgaagactt tttgtctgta gctcttgcat attgagtgta taaacccggc ttctggacca
2521 acccaagatg aataaactgg ggcagaaaat taaaaaaaaa aaaaaaa
//