LOCUS BC026351 2241 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens tetratricopeptide repeat domain 8, mRNA (cDNA clone
MGC:26813 IMAGE:4799330), complete cds.
ACCESSION BC026351
VERSION BC026351.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2241)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2241)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: h Column: 18.
FEATURES Location/Qualifiers
source 1..2241
/db_xref="H-InvDB:HIT000040214"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26813 IMAGE:4799330"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2241
/gene="TTC8"
/gene_synonym="BBS8"
/db_xref="GeneID:123016"
/db_xref="MIM:608132"
CDS 53..1648
/gene="TTC8"
/gene_synonym="BBS8"
/codon_start=1
/product="TTC8 protein"
/protein_id="AAH26351.1"
/db_xref="GeneID:123016"
/db_xref="MIM:608132"
/translation="MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQAAWILK
ARALTEMVYIDEIDVDQEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPI
TQAGRPITGFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSP
DGPFINLSRLNLTKYSQKPKLAKALFEYIFHHENDVKTIHLEDVVLHLGIYPFLLRNK
NHIEKNALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKSALKQQEMVDT
FLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNMSSAAEYYKEV
LKQDNTHVEAIACIGSNHFYSDQPEIALRFYRRLLQMGIYNGQLFNNLGLCCFYAQQY
DMTLTSFERALSLAENEEEAADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNNHAEAY
NNLAVLEMRKGHVEQARALLQTASSLAPHMYEPHFNFATISDKIGDLQRSYVAAQKSE
AAFPDHVDTQHLIKQLRQHFAML"
BASE COUNT 695 a 450 c 481 g 615 t
ORIGIN
1 acgcccacct ctctcctgga gcgctgggcc ttcgctggcc gcaccggcag ccatgagctc
61 ggagatggag ccgctgctcc tggcctggag ctattttagg cgcaggaagt tccagctctg
121 cgccgatcta tgcacgcaga tgctggagaa gtccccttat gaccaggcag cttggatctt
181 aaaagcaaga gcgctaacag aaatggtata catagatgaa attgatgtag atcaggaagg
241 aattgcagaa atgatgctgg atgaaaatgc tatagctcaa gttccacgcc ctggaacgtc
301 tttgaaactc cctggaacta atcagacagg agggcctagc caggccgtta ggccaatcac
361 acaagctgga agacccatta caggtttcct caggcccagc acgcagagtg gaaggccagg
421 cactatggaa caggctatca gaacacccag aaccgcctac acagcccgcc ctatcaccag
481 ctcctccgga agatttgtca ggctgggaac ggcttccatg cttacaagtc ctgatggacc
541 atttataaat ttatctaggc tgaatttaac aaagtattcc cagaaaccta agttggcaaa
601 ggctttgttt gagtatatct ttcatcatga aaatgatgtt aagactattc atcttgaaga
661 tgtagttcta catcttggaa tttacccatt cttattgagg aataaaaatc acattgaaaa
721 aaatgctttg gatctggctg ccctctccac agaacattct cagtacaagg actggtggtg
781 gaaagtacag attggaaaat gttactacag gttgggaatg tatcgtgaag cagaaaaaca
841 gtttaaatca gccctgaagc agcaggaaat ggtagataca tttctgtact tggcaaaagt
901 ttatgtctca ttggatcaac ctgtgactgc tttaaatctt ttcaaacaag gcttagataa
961 gtttccagga gaagtaaccc tgctctgtgg aattgcaaga atctatgagg aaatgaacaa
1021 tatgtcatca gcagcagaat attacaaaga agttttgaaa caagacaata ctcatgtgga
1081 agccatcgca tgcattggaa gcaaccactt ctattctgat cagccagaaa tagctctccg
1141 gttttacagg cggctgctgc agatgggcat ttataacggc cagcttttta acaatctggg
1201 gctgtgttgc ttctatgccc agcagtatga tatgactctg acctcatttg aacgtgccct
1261 ttctttggct gaaaatgaag aagaggcagc tgatgtctgg tacaacttgg gacatgtagc
1321 tgtgggaata ggagatacaa atttggccca tcagtgcttc aggctggctc tggtcaacaa
1381 caacaaccac gccgaggcct acaacaacct ggctgtgctg gagatgcgga agggccacgt
1441 tgaacaggca agggcactat tacaaactgc atcatcatta gcaccccata tgtatgaacc
1501 gcattttaat tttgcaacaa tctctgataa gattggagat ctgcagagaa gctatgttgc
1561 tgcgcagaag tctgaagcag catttccaga ccatgtggac acacaacatt taattaaaca
1621 attaaggcag cattttgcta tgctctgatt gttccttaga ccacatatgt tcttatgaag
1681 cagcattatg caaggggaaa aaagcactat gtctgtgtat gtatgtatat agtgtaatac
1741 gtatatttta acaaacctgt ccttgatatt agttaaggtg acacataagg gtgacacaga
1801 atgtgtaatg caaatttcat agtaatagta actttataaa ataatattat aaaatacagg
1861 atttaaacct ttctaaatag atcctgaaac tgtctctcac attatatagt agatgtttgt
1921 ttataatgtt tacaaaacat tttggtgaat ttcctcaatg ttttataaat gtacattttt
1981 taagtcctta agctgactct tagccatcat gtagcttaag gagtctgaaa tctgccatta
2041 aaactgcacc tttaagccag gtgtggtagc atgtgcctat agtcccagct acttgggagg
2101 tggaggtggg aggattataa atagagactt tccttaagac tttaaaaatg tatttaaaac
2161 tattttttat taaatacttt gtgatttcct attaagcttt aaaataaatc attgtgtaaa
2221 acaccaaaaa aaaaaaaaaa a
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