LOCUS BC026334 2573 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens prodynorphin, mRNA (cDNA clone MGC:26418
IMAGE:4819025), complete cds.
ACCESSION BC026334
VERSION BC026334.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2573)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2573)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32483402.
FEATURES Location/Qualifiers
source 1..2573
/db_xref="H-InvDB:HIT000040203"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26418 IMAGE:4819025"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2573
/gene="PDYN"
/gene_synonym="MGC26418"
/gene_synonym="PENKB"
/db_xref="GeneID:5173"
/db_xref="HGNC:HGNC:8820"
/db_xref="MIM:131340"
CDS 228..992
/gene="PDYN"
/gene_synonym="MGC26418"
/gene_synonym="PENKB"
/codon_start=1
/product="prodynorphin"
/protein_id="AAH26334.1"
/db_xref="GeneID:5173"
/db_xref="HGNC:HGNC:8820"
/db_xref="MIM:131340"
/translation="MAWQGLVLAACLLMFPSTTADCLSRCSLCAVKTQDGPKPINPLI
CSLQCQAALLPSEEWERCQSFLSFFTPSTLGLNDKEDLGSKSVGEGPYSELAKLSGSF
LKELEKSKFLPSISTKENTLSKSLEEKLRGLSDGFREGAESELMRDAQLNDGAMETGT
LYLAEEDPKEQVKRYGGFLRKYPKRSSEVAGEGDGDSMGHEDLYKRYGGFLRRIRPKL
KWDNQKRYGGFLRRQFKVVTRSQEDPNAYSGELFDA"
BASE COUNT 668 a 618 c 637 g 650 t
ORIGIN
1 attttgaagg ggctttggtg gtgttcacag ctgcctcttt ggcacctcct cccaagccgg
61 agtcaaggag gcccctgagc cttggaccag ccactgccac ctccgacctg ctcggccaga
121 agctgcccag ggacaaagca gagtgcaggt catttatctt caggctttga gatctgcgtg
181 gggggagctg ttgcagcagc ccaagccgca ggaattgctg agacaggatg gcctggcagg
241 ggctggtcct ggctgcctgc ctcctcatgt tcccctccac cacagcggac tgcctgtcgc
301 ggtgctcctt gtgtgctgta aagacccagg atggtcccaa acctatcaat cccctgattt
361 gctccctgca atgccaggct gccctgctgc cctctgagga atgggagaga tgccagagct
421 ttctgtcttt tttcaccccc tccacccttg ggctcaatga caaggaggac ttggggagca
481 agtcggttgg ggaagggccc tacagtgagc tggccaagct ctctgggtca ttcctgaagg
541 agctggagaa aagcaagttt ctcccaagta tctcaacaaa ggagaacact ctgagcaaga
601 gcctggagga gaagctcagg ggtctctctg acgggtttag ggagggagca gagtctgagc
661 tgatgaggga tgcccagctg aacgatggtg ccatggagac tggcacactc tatctcgctg
721 aggaggaccc caaggagcag gtcaaacgct atgggggctt tttgcgcaaa taccccaaga
781 ggagctcaga ggtggctggg gagggggacg gggatagcat gggccatgag gacctgtaca
841 aacgctatgg gggcttcttg cggcgcattc gtcccaagct caagtgggac aaccagaagc
901 gctatggcgg ttttctccgg cgccagttca aggtggtgac tcggtctcag gaagatccga
961 atgcttactc tggagagctt tttgatgcat aagcacctct tttcatggag tagagtcagg
1021 agaaacccct gacacctttt caggttggag tgcattcatt catcctctta tatgtgcccc
1081 ttccccatgc tcagctcagc attgtgtaca aaatatccaa gcccagccta tctctcttct
1141 gcgtgggagt atgttatttc tctggggtct gtgatgggga agggtggatg tcccttcccc
1201 acaataggct tagtgcttgg ctcagacacc tagactctaa aactatcagc agcggcagca
1261 gcagcagcag cagcagtttg tgatctgtcc ttccaacctg ttcacgtgac tcctcaattc
1321 cagggaacca gagcgatgtg ttctttgtac ctgtaggtct atgatgtcca aacttaacag
1381 atcacatgcc cctcttagaa gaaatatgag catgctccct catgcagata gtatacacat
1441 cataaacaaa gagtagaact ttaaaagaag gtaaataatc atacacagaa atcctaacat
1501 tatattccca aatctcaaaa gatctcctgt gcacctgact ttggagacga tgctttaggt
1561 aaaaagctta aacattgcct tatattggat caggaaccct tacagtagag ggtccagtct
1621 tctagtgggt ttaatgttta gtcagtgtac tctgagtcct cattgttcag aaaagcacct
1681 cttgaagaac tgacttcctg aactcccagt catgttggta ccctggacag tgcccaactc
1741 cttacagaag ggagtgaaaa cccctttcgg aaatgattga gagcagcctc ttgaatgctt
1801 aaatgatcaa ggagggagaa aggcaaacca atttgttctg tgcaacaaac tcaaaatgtg
1861 gaccagttcc ctcagccctc attaaactaa ttaaactgat gggtatcatg cttctactcc
1921 atggtgaact gaagcagagt caagctgatg aagttaagca caaccatgtt cttgagcagc
1981 tgaattggct gccaagagtc caagccatct ggcccaacat atgcactggg cattgggtaa
2041 gggactccag aagcagcagc tagaaagaga aaaagccctc ttcaatcccc ataatgcttc
2101 tttcctctta atgtctcaaa ataaaaccag aaagaggaat aaaatgatta agtgcttgag
2161 gccaaatgag ttcccttgat tcaaataacc ctgaatcaga ggcagagacc tcctgatgtc
2221 ttggtttcca tcaaagccct ccctgtctgt ctgtctctct tttgctctct cattcccagg
2281 cactctcttt tggtttgtgg gtccaggaga tgaggctgga taggagagga aaaggcttga
2341 gtctggataa tttgtataag atgctgctga gcacatctct tcatgcgcag tccccaggta
2401 tctgatgatg ttctgaaatg gatagattgt tttagagtta ttttgtgtcc tttaaaaaaa
2461 tcccatttat gcaatttact tggaatttgc ttagccttta ataggcttgt gtaatttcct
2521 gctcctccag tacaataaat aaaagaaaga tgctgatgaa aaaaaaaaaa aaa
//