LOCUS BC026333 2352 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens frizzled homolog 9 (Drosophila), mRNA (cDNA clone
MGC:26396 IMAGE:4791657), complete cds.
ACCESSION BC026333
VERSION BC026333.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2352)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2352)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: a Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62865872.
FEATURES Location/Qualifiers
source 1..2352
/db_xref="H-InvDB:HIT000040202"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26396 IMAGE:4791657"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2352
/gene="FZD9"
/gene_synonym="FZD3"
/db_xref="GeneID:8326"
/db_xref="HGNC:HGNC:4047"
/db_xref="MIM:601766"
CDS 226..2001
/gene="FZD9"
/gene_synonym="FZD3"
/codon_start=1
/product="frizzled homolog 9 (Drosophila)"
/protein_id="AAH26333.1"
/db_xref="GeneID:8326"
/db_xref="HGNC:HGNC:4047"
/db_xref="MIM:601766"
/translation="MAVAPLRGALLLWQLLAAGGAALEIGRFDPERGRGAAPCQAVEI
PMCRGIGYNLTRMPNLLGHTSQGEAAAELAEFAPLVQYGCHSHLRFFLCSLYAPMCTD
QVSTPIPACRPMCEQARLRCAPIMEQFNFGWPDSLDCARLPTRNDPHALCMEAPENAT
AGPAEPHKGLGMLPVAPRPARPPGDLGPGAGGSGTCENREKFQYVEKSRSCAPRCGPG
VEVFWSRRDKDFALVWMAVWSALCFFSTAFTVLTFLLEPHRFQYPERPIIFLSMCYNV
YSLAFLIRAVAGAQSVACDQEAGALYVIQEGLENTGCTLVFLLLYYFGMASSLWWVVL
TLTWFLAAGKKWGHEAIEAHGSYFHMAAWGLPALKTIVILTLRKVAGDELTGLCYVAS
TDAAALTGFVLVPLSGYLVLGSSFLLTGFVALFHIRKIMKTGGTNTEKLEKLMVKVGV
FSILYTVPATCVIVCYVYERLNMDFWRLRATEQPCAAAAGPGGRRDCSLPGGSVPTVA
VFMLKIFMSLVVGITNGVWVWSSKTFQTWQSLCYRKIAAGRARAKACHAPGSYGRGTH
CHYKAPTVVLHMTKTDPSLENPTHL"
BASE COUNT 353 a 802 c 795 g 402 t
ORIGIN
1 tggttcagcg gcggctccgg tggcagcggc ggtggcggct aggcgggctc ggcggctcct
61 gtccctcggg cggctgcccg ctcgctgccc agggcgcccg gacacacgtg ggcggctcag
121 cgatggcccg cgccccgcga cgtggcgggc aggcaccggg gcgcgggacc gctgagccca
181 agtgagccgg ggccgcgctc ccgccttcgg cccgggcctc ccgggatggc cgtggcgcct
241 ctgcgggggg cgctgctgct gtggcagctg ctggcggcgg gcggcgcggc actggagatc
301 ggccgcttcg acccggagcg cgggcgcggg gctgcgccgt gccaggcggt ggagatcccc
361 atgtgccgcg gcatcggcta caacctgacc cgcatgccca acctgctggg ccacacgtcg
421 cagggcgagg cggctgccga gctagcggag ttcgcgccgc tggtgcagta cggctgccac
481 agccacctgc gcttcttcct gtgctcgctc tacgcgccca tgtgcaccga ccaggtctcg
541 acgcccattc ccgcctgccg gcccatgtgc gagcaggcgc gcctgcgctg cgcgcccatc
601 atggagcagt tcaacttcgg ctggccggac tcgctcgact gcgcccggct gcccacgcgc
661 aacgacccgc acgcgctgtg catggaggcg cccgagaacg ccacggccgg ccccgcggag
721 ccccacaagg gcctgggcat gctgcccgtg gcgccgcggc ccgcgcgccc tcccggagac
781 ctgggcccgg gcgcgggcgg cagtggcacc tgcgagaacc gcgagaagtt ccagtacgtg
841 gagaagagcc gctcgtgcgc accgcgctgc gggcccggcg tcgaggtgtt ctggtcccgg
901 cgcgacaagg acttcgcgct ggtctggatg gccgtgtggt cggcgctgtg cttcttctcc
961 accgccttca ctgtgctcac cttcttgctg gagccccacc gcttccagta ccccgagcgc
1021 cccatcatct tcctctccat gtgctacaac gtctactcgc tggccttcct gatccgtgcg
1081 gtggccggag cgcagagcgt ggcctgtgac caggaggcgg gcgcgctcta cgtgatccag
1141 gagggcctgg agaacacggg ctgcacgctg gtcttcctac tgctctacta cttcggcatg
1201 gccagctcgc tctggtgggt ggtcctgacg ctcacctggt tcctggctgc cgggaagaaa
1261 tggggccacg aggccatcga ggcccacggc agctatttcc acatggctgc ctggggcctg
1321 cccgcgctca agaccatcgt catcctgacc ctgcgcaagg tggcgggtga tgagctgact
1381 gggctttgct acgtggccag cacggatgca gcagcgctca cgggcttcgt gctggtgccc
1441 ctctctggct acctggtgct gggcagtagt ttcctcctga ccggcttcgt ggccctcttc
1501 cacatccgca agatcatgaa gacgggcggc accaacacag agaagctgga gaagctcatg
1561 gtcaaggtcg gggtcttctc catcctctac acggtgcccg ccacctgcgt catcgtttgc
1621 tatgtctacg aacgcctcaa catggacttc tggcgccttc gggccacaga gcagccatgc
1681 gcagcggccg cggggcccgg aggccggagg gactgctcgc tgccaggggg ctcggtgccc
1741 accgtggcgg tcttcatgct caaaattttc atgtcactgg tggtggggat caccaacggc
1801 gtctgggtgt ggagctccaa gactttccag acctggcaga gcctgtgcta ccgcaagata
1861 gcagctggcc gggcccgggc caaggcctgc cacgcccccg ggagctacgg acgtggcacg
1921 cactgccact ataaggctcc caccgtggtc ttgcacatga ctaagacgga cccctctttg
1981 gagaacccca cacacctcta gccacacagg cctggcgcgg ggtggctgct gccccctcct
2041 tgccctccac gccctgcccc ctgcatcccc tagagacagc tgactagcag ctgcccagct
2101 gtcaaggtca ggcaagtgag caccggggac tgaggatcag ggcgggaccc cgtgaggctc
2161 attaggggag atgggggtct cccctaatgc gggggctgga ccaggctgag tccccacagg
2221 gtcctagtgg aggatgtgga ggggcggggc agaggggtcc agccggagtt tatttaatga
2281 tgtaatttat tgttgcgttc ctctggaagc tgtgactgga ataaaccccc gcgtggcaaa
2341 aaaaaaaaaa aa
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