LOCUS BC026280 2951 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens NCK interacting protein with SH3 domain, mRNA (cDNA
clone MGC:23891 IMAGE:4730420), complete cds.
ACCESSION BC026280
VERSION BC026280.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2951)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2951)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37577147.
FEATURES Location/Qualifiers
source 1..2951
/db_xref="H-InvDB:HIT000040178"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23891 IMAGE:4730420"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2951
/gene="NCKIPSD"
/gene_synonym="AF3P21"
/gene_synonym="DIP"
/gene_synonym="DIP1"
/gene_synonym="MGC23891"
/gene_synonym="ORF1"
/gene_synonym="SPIN90"
/gene_synonym="WASLBP"
/gene_synonym="WISH"
/db_xref="GeneID:51517"
/db_xref="HGNC:HGNC:15486"
/db_xref="MIM:606671"
CDS 78..2225
/gene="NCKIPSD"
/gene_synonym="AF3P21"
/gene_synonym="DIP"
/gene_synonym="DIP1"
/gene_synonym="MGC23891"
/gene_synonym="ORF1"
/gene_synonym="SPIN90"
/gene_synonym="WASLBP"
/gene_synonym="WISH"
/codon_start=1
/product="NCK interacting protein with SH3 domain"
/protein_id="AAH26280.1"
/db_xref="GeneID:51517"
/db_xref="HGNC:HGNC:15486"
/db_xref="MIM:606671"
/translation="MYRALYAFRSAEPNALAFAAGETFLVLERSSAHWWLAARARSGE
TGYVPPAYLRRLQGLEQDVLQAIDRAIEAVHNTAMRDGGKYSLEQRGVLQKLIHHRKE
TLSRRGPSASSVAVMTSSTSDHHLDAAAARQPNGVCRAGFERQHSLPSSEHLGADGGL
YQIPPQPRRAAPTTPPPPVKRRDREALMASGSGGHNTMPSGGNSVSSGSSVSSTSLDT
LYTSSSPSEPGSSCSPTPPPVPRRGTHTTVSQVQPPPSKASAPEPPAEEEVATGTTSA
SDDLEALGTLSLGTTEEKAAAEAAVPRTIGAELMELVRRNTGLSHELCRVAIGIIVGH
IQASVPASSPVMEQVLLSLVEGKDLSMALPSGQVCHDQQRLEVIFADLARRKDDAQQR
SWALYEDEGVIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLR
LLLLKCFGAMCSLDAAIISTLVSSVLPVELARDMQTDTQDHQKLCYSALILAMVFSMG
EAVPYAHYEHLGTPFAQFLLNIVEDGLPLDTTEQLPDLCVNLLLALNLHLPAADQNVI
MAALSKHANVKIFSEKLLLLLNRGDDPVRIFKHEPQPPHSVLKFLQDVFGSPATAAIF
YHTDMMALIDITVRHIADLSPGDKLRMESLSLMHAIVRTTPYLQHRHRLPDLQAILRR
ILNEEETSPQCQMDRMIVREMCKEFLVLGEAPS"
BASE COUNT 627 a 955 c 812 g 557 t
ORIGIN
1 gcggctcggc gctccgggcc tggcgttgtg gcgccgcagc ccttgccacc ttccctgcac
61 ctgccctgcc cggcctcatg taccgcgcgc tgtacgcgtt ccgctcggcg gagcccaacg
121 cgctggcgtt cgccgcgggc gagaccttcc tggtgctaga gcgaagcagc gcgcactggt
181 ggctggccgc gcgggcgcgc agtggtgaga cgggctacgt gccgccagcc tacctgcgcc
241 gcctgcaggg cctggagcag gatgtcctcc aggccattga ccgggccatc gaggctgtac
301 acaacacagc catgcgggat ggtggcaagt acagcctgga acagcgtgga gtcctccaga
361 agctgatcca ccaccggaaa gagaccctgt cacgcagagg cccttcagcc tccagtgttg
421 cagttatgac ctcatcaacc agtgaccacc acttggatgc tgctgcagcc aggcagccca
481 atggggtgtg tcgagctggg ttcgagcggc agcacagcct acccagttct gagcatcttg
541 gggcagatgg aggcctctac cagatcccac cacagcctcg ccgagcagca cccaccacac
601 cgcccccacc agtgaagcgc cgagaccgcg aggccctgat ggcctctggg agtggtggcc
661 acaacaccat gccctccggg ggtaactctg tgtccagcgg ctcctcagtc agcagcacct
721 ccctggacac gctctatacc agctccagcc catctgaacc aggctccagc tgctcaccca
781 cacccccacc tgtgccccgc cgaggcaccc acaccaccgt gtcccaagtc cagccccctc
841 cctccaaggc atcagcacct gaaccccctg cagaagaaga agtggcaact ggtacaacct
901 cagcctctga tgacctggaa gccctgggta cactgagcct ggggaccaca gaggagaagg
961 cagcagctga ggcggctgtg cccaggacca ttggggccga gctgatggag ctggtgcgga
1021 gaaacactgg cctgagccac gaattatgcc gggtggccat cggcatcata gtgggtcaca
1081 tccaggcctc ggtgccggcc agctcaccag tcatggagca ggtcctcctc tcactcgtag
1141 agggcaagga cctcagcatg gccctgccct cagggcaggt ctgccacgac cagcagaggc
1201 tggaggtgat ctttgcagac ctggctcgcc ggaaggacga cgcccagcag cgcagttggg
1261 cactatatga ggatgagggt gtcatccgct gctacctaga ggagctgctg catattctga
1321 ctgatgcaga ccctgaagtt tgcaagaaaa tgtgcaagag aaacgagttc gagtctgtcc
1381 tggccttggt ggcctattac caaatggaac accgagcatc actgcggctg ctgctcctca
1441 agtgctttgg cgccatgtgc agcctggatg cagccatcat ctccacgctt gtgtcatccg
1501 tgctgcctgt agagctggcg agggacatgc agacagacac gcaggaccac cagaaactct
1561 gttactctgc cctcatcctg gccatggtct tctccatggg agaggcagtg ccctatgcac
1621 actatgagca cctgggcacg cctttcgccc agttcctact gaacatcgtc gaggatgggc
1681 tgcccttgga caccacagag cagctgccgg acctctgcgt gaacctgctt ctggctctca
1741 acctgcacct gccagctgct gaccagaatg tcatcatggc tgccctgagc aaacacgcca
1801 atgtcaagat cttctccgag aagctgttgt tgctcctgaa cagaggggat gaccctgtgc
1861 gcatcttcaa acatgagcca cagccaccac actctgtcct caagttcctg caggacgtgt
1921 ttggcagccc ggccacagct gccatcttct accacacaga catgatggct ctcattgaca
1981 tcactgtgcg gcacatcgca gacctgtcac caggagacaa gctgcgcatg gagtccctct
2041 ccctgatgca tgctatagtc cgcaccacac cctacctgca gcaccgccac cggctacccg
2101 acctgcaggc catactgcga cgcatcctga atgaggagga gacctcaccc cagtgccaga
2161 tggaccgcat gattgtccga gagatgtgca aggaattcct ggtgctgggg gaggctccca
2221 gctagcacct tgctgtcctc ccttccctgc agctccagtc agtgtgcagg ggactcaggg
2281 gcttggccct aagaatgttt tgcactgaca gtgggagggg ataaggtggc agaaggaacc
2341 tgagcaggac ccccacctga agtagaactt aagagagggg ccaagtgtag gattggggac
2401 catggtctgg gagctgttct ggggcagggg gaatatgcaa gctaaagccc ctctataccc
2461 tggtaggctt cctcttcagc atgcccccct cttcacccca cacccatgtg tacactcaga
2521 gtcctgctgc cgctccaggc tggaccagac ccccatcccc acccctcctg gtctgtatcc
2581 tgggcctcag caagccatgc ccctggggtg aggggaggca tctcccacca gctctattct
2641 ttgccttagc tttgcagtga gtgctgctca tgtcctcccc tccacccgca catgggggtc
2701 gctgcccttc actcctaccc ccagaggcct tggccaagct gctgctttga aagcgggatc
2761 ttggagacag gccatccatc ctggagcctc atggaacagg atgatggcac tgagaaagcc
2821 aatgaccgaa tctcttttct ctgtaaaaat gtagactgaa aagccatgtg tattttccta
2881 tgtgctgtag ctctcctttg gaaataaatc acaggcatct gcaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa a
//