LOCUS BC026274 2531 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens retinol dehydrogenase 11 (all-trans/9-cis/11-cis), mRNA (cDNA clone MGC:23798 IMAGE:4250934), complete cds. ACCESSION BC026274 VERSION BC026274.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2531) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2531) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 35 Row: e Column: 15. FEATURES Location/Qualifiers source 1..2531 /db_xref="H-InvDB:HIT000040174" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23798 IMAGE:4250934" /tissue_type="Prostate" /clone_lib="NIH_MGC_83" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..2531 /gene="RDH11" /gene_synonym="ARSDR1" /gene_synonym="CGI-82" /gene_synonym="FLJ32633" /gene_synonym="HCBP12" /gene_synonym="MDT1" /gene_synonym="PSDR1" /gene_synonym="RALR1" /gene_synonym="SCALD" /db_xref="GeneID:51109" /db_xref="HGNC:HGNC:17964" /db_xref="MIM:607849" CDS 28..984 /gene="RDH11" /gene_synonym="ARSDR1" /gene_synonym="CGI-82" /gene_synonym="FLJ32633" /gene_synonym="HCBP12" /gene_synonym="MDT1" /gene_synonym="PSDR1" /gene_synonym="RALR1" /gene_synonym="SCALD" /codon_start=1 /product="retinol dehydrogenase 11 (all-trans/9-cis/11-cis)" /protein_id="AAH26274.1" /db_xref="GeneID:51109" /db_xref="HGNC:HGNC:17964" /db_xref="MIM:607849" /translation="MVELMFPLLLLLLPFLLYMAAPQIRKMLSSGVCTSTVQLPGKVV VVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLS DTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLL LEKLKESAPSRIVNVSSLAHHLGRIHFHNLQGEKFYNAGLAYCHSKLANILFTQELAR RLKGSGVTTYSVHPGTVQSELVRHSSFMRWMWWLFSFFIKTPQQGAQTSLHCALTEGL EILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLLGLSID" BASE COUNT 799 a 508 c 545 g 679 t ORIGIN 1 gctctggtgc cgctgcagcc ggcagagatg gttgagctca tgttcccgct gttgctcctc 61 cttctgccct tccttctgta tatggctgcg ccccaaatca ggaaaatgct gtccagtggg 121 gtgtgtacat caactgttca gcttcctggg aaagtagttg tggtcacagg agctaataca 181 ggtatcggga aggagacagc caaagagctg gctcagagag gagctcgagt atatttagct 241 tgccgggatg tggaaaaggg ggaattggtg gccaaagaga tccagaccac gacagggaac 301 cagcaggtgt tggtgcggaa actggacctg tctgatacta agtctattcg agcttttgct 361 aagggcttct tagctgagga aaagcacctc cacgttttga tcaacaatgc aggagtgatg 421 atgtgtccgt actcgaagac agcagatggc tttgagatgc acataggagt caaccacttg 481 ggtcacttcc tcctaaccca tctgctgcta gagaaactaa aggaatcagc cccatcaagg 541 atagtaaatg tgtcttccct cgcacatcac ctgggaagga tccacttcca taacctgcag 601 ggcgagaaat tctacaatgc aggcctggcc tactgtcaca gcaagctagc caacatcctc 661 ttcacccagg aactggcccg gagactaaaa ggctctggcg ttacgacgta ttctgtacac 721 cctggcacag tccaatctga actggttcgg cactcatctt tcatgagatg gatgtggtgg 781 cttttctcct ttttcatcaa gactcctcag cagggagccc agaccagcct gcactgtgcc 841 ttaacagaag gtcttgagat tctaagtggg aatcatttca gtgactgtca tgtggcatgg 901 gtctctgccc aagctcgtaa tgagactata gcaaggcggc tgtgggacgt cagttgtgac 961 ctgctgggcc tctcaataga ctaacaggca gtgccagttg gacccaagag aagactgcag 1021 cagactacac agtacttctt gtcaaaatga ttctccttca aggttttcaa aacctttagc 1081 acaaagagag caaaaccttc cagccttgcc tgcttggtgt ccagttaaaa ctcagtgtac 1141 tgccagattc gtctaaatgt ctgtcatgtc cagatttact ttgcttctgt tactgccaga 1201 gttactagag atatcataat aggataagaa gaccctcata tgacctgcac agctcatttt 1261 ccttctgaaa gaaactacta cctaggagaa tctaagctat agcagggatg atttatgcaa 1321 atttgaacta gcttctttgt tcacaattca gttcctccca accaaccagt cttcacttca 1381 agagggccac actgcaacct cagcttaaca tgaataacaa agactggctc aggagcaggg 1441 cttgcccagg catggtggat caccggaggt cagtagttca agaccagcct ggccaacatg 1501 gtgaaacccc acctctacta aaaattgtgt atatctttgt gtgtcttcct gtttatgtgt 1561 gccaagggag tattttcaca aagttcaaaa cagccacaat aatcagagat ggagcaaacc 1621 agtgccatcc agtctttatg caaatgaaat gctgcaaagg gaagcagatt ctgtatatgt 1681 tggtaactac ccaccaagag cacatgggta gcagggaaga agtaaaaaaa gagaaggaga 1741 atactggaag atatgcacaa aatgaaggga ctagttaagg attaactagc cctttaagga 1801 ttaactagtt aaggattaat agcaaaagat attaaatatg ctaacatagc tgtggaggaa 1861 ttgagggcaa gcacccagga ctgatgaggt cttaacaaaa accagtgtgg caaaaaaaaa 1921 aaaaaaaaaa aaaaaaaaaa atcctaaaaa caaacaaaca aaaaaaacaa ttcttcattc 1981 agaaaaatta tcttagggac tgatattggt aattatggtc aatttaataa tattttgggg 2041 catttcctta cattgtcttg acaagattaa aatgtctgtg ccaaaatttt gtattttatt 2101 tggagacttc ttatcaaaag taatgctgcc aaaggaagtc taaggaatta gtagtgttcc 2161 catcacttgt ttggagtgtg ctattctaaa agattttgat ttcctggaat gacaattata 2221 ttttaacttt ggtgggggaa agagttatag gaccacagtc ttcacttctg atacttgtaa 2281 attaatcttt tattgcactt gttttgacca ttaagctata tgtttagaaa tggtcatttt 2341 acggaaaaat tagaaaaatt ctgataatag tgcagaataa atgaattaat gttttactta 2401 atttatattg aactgtcaat gacaaataaa aattcttttt gattattttt tgttttcatt 2461 taccagaata aaaactaaga attaaaagtt tgattacagt caaaaaaaaa aaaaaaaaaa 2521 aaaaaaaaaa a //