LOCUS BC026268 1349 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens jumonji domain containing 1C, mRNA (cDNA clone
IMAGE:4703438), partial cds.
ACCESSION BC026268
VERSION BC026268.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1349)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1349)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: b Column: 12.
FEATURES Location/Qualifiers
source 1..1349
/db_xref="H-InvDB:HIT000091239"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4703438"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..>1349
/gene="JMJD1C"
/gene_synonym="DKFZp761F0118"
/gene_synonym="RP11-10C13.2"
/db_xref="GeneID:221037"
/db_xref="HGNC:HGNC:12313"
/db_xref="MIM:604503"
CDS <1..>1349
/gene="JMJD1C"
/gene_synonym="DKFZp761F0118"
/gene_synonym="RP11-10C13.2"
/codon_start=1
/product="JMJD1C protein"
/protein_id="AAH26268.1"
/db_xref="GeneID:221037"
/db_xref="HGNC:HGNC:12313"
/db_xref="MIM:604503"
/translation="IHHSLERKEGSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPE
PKDSQANFKSSSEQSLTEMWRPNNNLSKEKTEWHVEKSSGKLQAAMASVIVRPSSSTK
TDSMPAMQLASKDRVSERSSAGAHKTDCLKLAEAGETGRIILPNVNSDSVHTKSEKNF
QAVSQGSVPSSVMSAVNTMCNTKTDVITSAADTTSVSSWGGSEVISSLSNTILASTSS
ECVSSKSVSQPVAQKQECKVSTTAPVTLASSKTGSVVQPSSGFSGTTDFIHLKKHKAA
LAAAQYKSSNASETEPNAIKNQTLSASLPLDSTVICSTINKANSVGNGQASQTSQPNY
HTKLKKAWLTRHSEEDKNTNKMENSGNSVSEIIKPCSVNLIASTSSDIQNSVDSKIIV
DKYVKDDKVNRRKAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKKKKKKKKK"
BASE COUNT 504 a 269 c 265 g 311 t
ORIGIN
1 atccatcaca gcctggaaag aaaggaaggc agctatagta gtctttcccc tccaacttta
61 actccggtga tgccagtaaa tgctggtggt aaagttcaag aatcacagaa gcctccaact
121 ctaatacccg aaccaaaaga ctcccaggca aattttaaga gttcttcaga acagagtttg
181 acggagatgt ggagacctaa taataacctc agcaaagaga aaactgaatg gcatgtggag
241 aaaagcagcg gaaagttaca ggctgctatg gcatctgtca ttgtgcgtcc atcttctagt
301 acaaaaactg atagtatgcc agcaatgcag ttagcttcta aagatcgagt tagtgaaaga
361 tcttcagctg gggcacataa aacagattgc ctcaaactag cagaagccgg agaaactgga
421 agaatcattt tgccaaatgt gaattcagac agtgttcaca caaaatctga aaaaaacttt
481 caggctgtct cacagggcag tgttcccagt tcagtcatgt ctgctgtaaa tacgatgtgt
541 aataccaaaa cggatgtaat cacatctgct gccgatacta ccagtgtttc cagctggggt
601 ggttcagaag taatttcctc tttatcaaat accattttgg cctctacatc atcagaatgt
661 gtatcttcaa aaagtgtcag tcagccagtg gctcaaaaac aagaatgcaa ggtcagcacc
721 acagcaccag ttacattagc cagtagtaag acaggaagtg ttgttcaacc cagttctggg
781 ttctcaggca caactgattt tatccattta aaaaagcaca aggcagcatt ggctgcagct
841 cagtataaaa gtagtaatgc cagtgagact gaacctaatg ctataaaaaa tcagacactt
901 tcagcctccc ttcctctgga tagcactgta atctgtagta caattaacaa agcaaactct
961 gtaggaaatg ggcaagcttc ccagacaagt caaccaaact accatactaa actgaaaaag
1021 gcctggctca ccagacactc agaagaagat aaaaatacta ataaaatgga aaattcaggg
1081 aattctgtat cagaaattat taagccatgt tctgtcaact taatagcctc tacatctagt
1141 gatatacaaa atagtgtaga tagtaagatc atagttgata aatatgtaaa agatgataaa
1201 gtcaacagga gaaaagccaa aagaacttat gaatctggct ctgaaagtgg agactcagat
1261 gaaagtgaaa gcaagtcaga gcaaaggact aaaagacaac ctaagccaac ttacaaaaag
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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