LOCUS BC026242 1874 bp mRNA linear HTC 04-AUG-2006
DEFINITION Homo sapiens mRNA similar to opsin 3 (encephalopsin, panopsin)
(cDNA clone IMAGE:4669517).
ACCESSION BC026242
VERSION BC026242.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1874)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1874)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: j Column: 11
This clone has the following problem: chimeric.
FEATURES Location/Qualifiers
source 1..1874
/db_xref="H-InvDB:HIT000333925"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4669517"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_60"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 490 a 458 c 426 g 500 t
ORIGIN
1 gcgcggtagc gcgggcccct cagtgcacaa tggccagagc aggcggcgga gccccagccc
61 cacccagtgc ggagcgcgcc gcgagccccg ccgcaagctg agcgcctccg cccgccaggc
121 gcgccggcgc cgggccatgt actcggggaa ccgcagcggc ggccacggct actgggacgg
181 cggcggggcc gcgggcgctg aggggccggc gccggcgggg acactgagcc ccgcgcccct
241 cttcagcccc ggcacctacg agcgcctggc gctgctgctg ggctccattg ggctgctggg
301 cgtcggcaac aacctgctgg tgctcgtcct ctactacaag ttccagcggc tccgcactcc
361 cactcacctc ctcctggtca acatcagcct cagcgacctg ctggtgtccc tcttcggggt
421 cacctttacc ttcgtgtcct gcctgaggaa cggctgggtg tgggacaccg tgggctgcgt
481 gtgggacggg tttagcggca gcctcttcgc ttcgttgtgt ggaagatctt cagacaattc
541 aagtgatcaa gattttaaaa tatgaaaaga aactggccaa aatgtgcttt ttaatgatat
601 tcaccttcct ggtctgttgg atgccttata tcgtgatctg cttcttggtg gttaatggtc
661 atggtcacct ggtcactcca acaatatcta ttgtttcgta cctctttgct aaatcgaaca
721 ctgtatacaa tccagtgatt tatgtcttca tgatcagaaa gtttcgaaga tcccttttgc
781 agcttctgtg cctccgactg ctgaggtgcc agaggcctgc taaagaccta ccagcagctg
841 gaagtgaaat gcagatcaga cccattgtga tgtcacagaa agatggggac aggccaaaga
901 aaaaagtgac tttcaactct tcttccatca tttttatcat caccagtgat gaatcactgt
961 cagttgacga cagcgacaaa accaatgggt ccaaagttga tgtaatccaa gttcgtcctt
1021 tgtaggaatg aagaatggca acgaaagatg gggccttaaa ttggatgcca cttttggact
1081 ttcatcataa gaagtgtctg gaatacccgt tctatgtaat atcaacagaa ccttgtggtc
1141 cagcaggaaa tccgaattgc ccatatgctc ttgggcctca ggaagaggtt gaacaaaaac
1201 aaattctttt aattcaacgg gtgctttaca taatgaaaaa accacttgtg gcacacgatg
1261 ggcatctaac atcatcatct tctaatgtgt tggagatttt catttcaaat atatttttta
1321 aattactcta ttttccaaaa cacataatgc atttttctcg aaaatacctt actgtaaaaa
1381 taactgtcgc gtacacatgt gtgaagtagc tagaacatac tgaatttttt ttgtactgtt
1441 ggactctatt cagtgtcatg tcctatatct gatcaagtta tcaaggagat aattctagaa
1501 tgaaaaagaa aatcctcttg ttggaaacaa aagacgtttt atatgtgcag tatgacaaag
1561 aggagtttca gagacaactt tgaatccttg tcagcctgga gaccagcacc agaggaatct
1621 acaaggcaaa ctcccatata tttgcttccc ccaaattgct gcccctacag actcaaagct
1681 ctttttcttt gttttgttgt ttctctaaaa atttactgtt ctttgtcgat gctatataag
1741 ccagggagtt ctaagacgcc agctctttga gatttgctca ttcccctgta tttcccacat
1801 atatattaca tatacccgct aataaattta tgtttgtttt tagaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaa
//