LOCUS BC026241 1896 bp mRNA linear HUM 18-MAY-2004
DEFINITION Homo sapiens ubiquitin protein ligase E3C, mRNA (cDNA clone
IMAGE:4696496), complete cds.
ACCESSION BC026241
VERSION BC026241.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1896)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1896)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661855
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1896
/db_xref="H-InvDB:HIT000040157"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4696496"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1896
/gene="UBE3C"
/gene_synonym="KIAA0010"
/db_xref="GeneID:9690"
CDS 317..1531
/gene="UBE3C"
/gene_synonym="KIAA0010"
/codon_start=1
/product="UBE3C protein"
/protein_id="AAH26241.1"
/db_xref="GeneID:9690"
/translation="MFSFEGDFKTRPKVSLGGASRKYSIQRSAFDRCATLSQSGGAFP
IANGPNLTLLVRQLLFFYKQNEDSKRLIWLYQNLIKHSSLFVKQLDGSERLTCLFQIK
RLMSLCCRLLQNCNDDSLNVALPMRMLEVFSSENTYLPVLQDASYVVSVIEQILHYMI
HNGYYRSLYLLINSKLPSSIEYSDLSRVPIAKILLENVLKPLHFTYNSCPEGARQQVF
TAFTEEFLAAPFTDQIFHFIIPALADAQTVFPYEPFLNALLLIESRCSRKSGGAPWLF
YFVLTVGENYLGALSEEGLLVYLRVLQTFLSQLPVSPASASCHDSASDSEEESEEADK
PSSPEDGRLSVSYITEECLKKLDTKQQTNTLLNLVWRDSASEEVFTTMASVCHTLMVQ
HRMMVPKVRVYK"
BASE COUNT 490 a 449 c 484 g 473 t
ORIGIN
1 gcagggccgc gcacgcactg acggctgacc gccatcttcc ctcccgaggc ggcagttcca
61 ggtgcaagcg ccgggtttgc tgcccgctgg gcgcccctgc agcggcccga gctgtggccg
121 gcgtggatga ggggcaggcg aggcagggcc gcccctccag tattgccgcc cctcccgccc
181 cagggcaggg ctgggagggt acagcccggg ggcgggctcg ggtcgcctcc cggccgccgc
241 gtcctcgctg ccccgtgccc cgcccgcccg gctgcttccg cggcggcgct gcccgcacat
301 gggctaggct gccaggatgt tcagcttcga aggcgacttc aagacgcggc ccaaggtgtc
361 ccttggcggc gcgagcagga agtattccat ccaaagaagt gcatttgatc gctgtgctac
421 cttgtcacag tccgggggcg cttttcccat tgctaatggc cccaacctta cccttttggt
481 aaggcagctt ctgttttttt acaaacaaaa tgaagactca aaacgtttga tatggctgta
541 tcagaactta attaaacaca gctctctgtt tgtcaagcag ttggatggat ctgagagact
601 tacatgctta tttcagataa aaagattgat gagcctctgt tgcaggttgc tgcaaaactg
661 taatgatgac agtttgaatg ttgcacttcc aatgagaatg cttgaagtat tttcgtctga
721 gaatacttac ttgcctgttt tacaagatgc tagctatgtg gtgtcagtga ttgaacaaat
781 tttgcactac atgattcaca atgggtatta taggtctcta tatttgttga ttaacagcaa
841 gcttccatca agtattgaat attctgattt atctcgagtt cctatagcaa aaattttgct
901 agagaatgtt ctaaaaccat tgcactttac ttacaactcc tgtccggaag gtgcgaggca
961 acaagttttt acagccttca cagaggagtt tctggcagca ccttttacag atcagatttt
1021 tcatttcatc attccggcgc ttgcagatgc gcagaccgtt ttcccttacg agccctttct
1081 gaatgcactg ttgttaatag agagtagatg ttcaagaaag agtggtggag caccctggct
1141 tttctatttc gttttaactg ttggcgaaaa ttatttgggg gccctctctg aggaagggct
1201 gctggtgtat ttgcgggtgc tgcagacctt cctctctcag ttaccagtct ctcctgccag
1261 cgcgagctgt cacgactcag ccagtgactc tgaggaggag agtgaagaag ccgacaagcc
1321 ctcaagcccg gaggatggca gactgtcagt atcatacata acagaggaat gcctgaagaa
1381 gctggacaca aagcagcaga ccaacaccct gctcaacctg gtgtggaggg actctgcgag
1441 cgaggaggtc ttcaccacca tggcctccgt ctgccacacg ctgatggtgc agcaccgcat
1501 gatggtaccc aaagtcaggg tgtacaaatg aatgtggaga cctttgtacc ctgacatgga
1561 aagatttccg agacagatgc gtacatgaaa accgggaaga cacaggacag tatgtagaag
1621 aaccggcttt tcctataaga aggatggaaa aaataggaat atatattcat attgcataaa
1681 gaaacttgga agcatataca agaaactcat gaaagtgaac actcgtgtct gaatatgccg
1741 aggaagctgg ggctggagca gaagtgctct tctgagtaca ctatttttat atcactttta
1801 agttttggat taggtgaatg acttaatatt ttaaaattgg ttaagtaata aatgaattgc
1861 cagcccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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