LOCUS BC026236 2618 bp mRNA linear HUM 26-JUN-2008
DEFINITION Homo sapiens zinc finger, HIT type 6, mRNA (cDNA clone MGC:22219
IMAGE:4664103), complete cds.
ACCESSION BC026236
VERSION BC026236.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2618)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2618)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: i Column: 23.
FEATURES Location/Qualifiers
source 1..2618
/db_xref="H-InvDB:HIT000040155"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22219 IMAGE:4664103"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_61"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2618
/gene="ZNHIT6"
/gene_synonym="BCD1"
/gene_synonym="NY-BR-75"
/db_xref="GeneID:54680"
/db_xref="HGNC:HGNC:26089"
CDS 137..1549
/gene="ZNHIT6"
/gene_synonym="BCD1"
/gene_synonym="NY-BR-75"
/codon_start=1
/product="zinc finger, HIT type 6"
/protein_id="AAH26236.1"
/db_xref="GeneID:54680"
/db_xref="HGNC:HGNC:26089"
/translation="MEFAAENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGG
GEEGTGLTGIKEIGDGEEGSGQRPEEIPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVE
DRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEEKVKEEVMDWSEVKEEKDNLE
IKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKEEPPINHPVGCKRKLAMS
RCETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKTAYISIQQFTEMNLLS
DYRFLEDVARTADHISRDAFLKRPISNKYMYFMKNRARRQGINLKLLPNGFTKRKENS
TFFDKKKQQFCWHVKLQFPQSQAEYIEKRVPDDKTINEILKPYIDPEKSDPVIRQRLK
AYIRSQTGVQILMKIEYMQQNLVRYYELDPYKSLLDNLRNKVIIEYPTLHVVLKGSNN
DMKVLHQVKSESTKNVGNEN"
BASE COUNT 822 a 453 c 637 g 706 t
ORIGIN
1 aggctattcc gggtttgtgg ctgcttggct ccacacgtgg gccgccgtag gtattccgac
61 cggtaattcc tcctattggt gtgcagcagc cacattgaag gatagagtgg cagcagaggc
121 caaggatcgt gagttgatgg agtttgctgc tgaaaatgaa gggaagtctg ggggaggtct
181 ccacagcgta gctgaggggg tgcggctaag tccagagcct ggcagggagg gagtaaggga
241 cttagcaggg gcggaggagt tcggcggcgg agaggagggg acagggctga cagggataaa
301 ggagataggg gatggagagg aaggaagtgg acaaaggcca gaggaaatac cgatggacct
361 aacggtagtg aagcaggaaa ttatagactg gccaggtaca gaaggcaggt tggctggcca
421 gtgggtagaa caggaggtgg aggataggcc tgaggtgaag gatgagaacg caggcgtatt
481 ggaggtgaag caggagacgg atagtagttt agtggtaaaa gaagcgaagg tgggtgaacc
541 agaggtaaag gaagagaagg taaaggaaga ggtaatggac tggtcagaag tgaaggaaga
601 gaaggataac ttggagataa aacaggagga gaagtttgtt ggtcaatgca taaaagagga
661 attgatgcat ggagagtgtg taaaagaaga gaaggatttc ctgaagaaag aaatcgtgga
721 tgatacaaag gtgaaagaag agcctccgat aaatcacccg gtgggctgca agcggaaact
781 ggccatgtca aggtgtgaga cttgtggtac agaagaagca aagtacagat gtccacgttg
841 tatgcgatat tcctgcagtt tgccctgtgt aaagaaacac aaagcagaac tgacatgtaa
901 tggagttcga gataaaactg catacatttc aatacaacag tttactgaaa tgaatctcct
961 aagtgattat cgatttttgg aagatgtggc aagaacagcg gaccatattt ctagagatgc
1021 ttttttgaag agaccaataa gcaataaata tatgtacttt atgaaaaatc gtgcccggag
1081 gcaaggtatt aacttaaaac ttctacccaa tggattcacc aagaggaagg agaattcaac
1141 cttttttgat aagaaaaaac aacagttttg ttggcatgtg aagctccagt ttcctcaaag
1201 tcaagctgag tacatagaaa aaagagtacc agatgataaa actattaatg aaatcctaaa
1261 accttacatt gatcctgaaa agtctgatcc tgtaattcgt caaaggttga aagcctacat
1321 tcgctctcag actggggttc agattttaat gaagattgaa tatatgcagc aaaatttagt
1381 aagatattat gaactagatc cttataaaag tctcctagac aatttgagga acaaagtgat
1441 cattgagtat ccaacattac atgtggtatt gaaaggatcc aataatgaca tgaaagttct
1501 tcaccaagtg aagagtgaat ctaccaagaa cgttggcaat gaaaattgag catttttttc
1561 tggaagaaga aagtgaaaac ttccagacaa ctgcagcaga ctctgcattg atgggctgtt
1621 ggctgattgg ggtattgtca atgggtgatt ggaatttttt ctttgtatga aaaataagct
1681 taactctttt aaaaaatgta ttttataacc tcttgaatta attgacttgt aagacccatt
1741 tattcatatt aagaactctc ctttgcactt gatcagcata gtacttatta ggccctggct
1801 ttttaatatg cttaattgct taattccata aactgaaaac tttttttttc ttttttcttt
1861 ctttttttga gatggggtct tggagtgcaa gtggtatgag catagcttcc tcaaattcct
1921 gggctcgaat ggtcctctca ctgcagcctc ccaacaggct ggtaccacca cactcagcta
1981 agttttttgt tgttgttttt ttttggtaga gacagggttg cgctctttcg cccaggctgg
2041 tctcaaattt gtggcctcaa gcaatccttc cacctcagac tccaaagcat tgggattaca
2101 ggcatcagcc accacacctg gccttgaaca ttttttattt gttaatttca tgcgtgacga
2161 aacccaagga tcacccatgt caaccacaaa gttggcattc cctttagtag aacctcacta
2221 aacggaaagg ctgtacaacg caccgtctag ccacaggaga actaatcttc tatcagttgc
2281 cctttcttct ttggagtttt tatgtaactt acccttgtga gacaagtttt ctacttgaga
2341 aactcctagt acaatgtctt atactagaag cctggataaa tactattaac tactgtttct
2401 tatattcact tcagaaaatc agtggctcca cattgtttga gccattagtg ataacaaatt
2461 tggatctact tactcaagtc ttatgaattc tgtgcctttc atcacattcc tagcccactc
2521 tcatcattac tgcagaaggg tgttgtgatg accagtttta tactgtgttt tgatatgtct
2581 agcaataaca aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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