LOCUS BC026215 2189 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens syntrophin, alpha 1 (dystrophin-associated protein A1,
59kDa, acidic component), mRNA (cDNA clone MGC:21330
IMAGE:4413197), complete cds.
ACCESSION BC026215
VERSION BC026215.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2189)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2189)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC026215.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18765742.
FEATURES Location/Qualifiers
source 1..2189
/db_xref="H-InvDB:HIT000040145"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21330 IMAGE:4413197"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2189
/gene="SNTA1"
/gene_synonym="dJ1187J4.5"
/gene_synonym="TACIP1"
/db_xref="GeneID:6640"
/db_xref="HGNC:HGNC:11167"
/db_xref="MIM:601017"
CDS 113..1630
/gene="SNTA1"
/gene_synonym="dJ1187J4.5"
/gene_synonym="TACIP1"
/codon_start=1
/product="syntrophin, alpha 1 (dystrophin-associated
protein A1, 59kDa, acidic component)"
/protein_id="AAH26215.1"
/db_xref="GeneID:6640"
/db_xref="HGNC:HGNC:11167"
/db_xref="MIM:601017"
/translation="MASGRRAPRTGLLELRAGAGSGAGGERWQRVLLSLAEDVLTVSP
ADGDPGPEPGAPREQEPAQLNGAAEPGAGPPQLPEALLLQRRRVTVRKADAGGLGISI
KGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQVLKKTGK
EVVLEVKYMKDVSPYFKNSTGGTSVGWDSPPASPLQRQPSSPGPTPRNFSEAKHMSLK
MAYVSKRCTPNDPEPRYLEICSADGQDTLFLRAKDEASARSWATAIQAQVNTLTPRVK
DELQALLAATSTAGSQDIKQIGWLTEQLPSGGTAPTLALLTEKELLLYLSLPETREAL
SRPARTAPLIATRLVHSGPSKGSVPYDAELSFALRTGTRHGVDTHLFSVESPQELAAW
TRQLVDGCHRAAEGVQEVSTACTWNGRPCSLSVHIDKGFTLWAAEPGAARAVLLRQPF
EKLQMSSDDGASLLFLDFGGAEGEIQLDLHSCPKTIVFIIHSFLSAKVTRLGLLA"
BASE COUNT 410 a 694 c 695 g 390 t
ORIGIN
1 ggcggctggc ccagccgggc ccccgctgcc ctctgccctg ggcgcttggt cggagcgggc
61 tgggcaaagc gggacagggc gagcgcggcg gcccgggggc tcggaggcga agatggcgtc
121 cggcaggcgc gccccgcgca ccgggctgct ggagctgcgc gccggggcgg gctcgggggc
181 cggcggcgag cgatggcagc gggtgctgct gagtctggcg gaggacgtgc tgaccgtgag
241 ccccgccgac ggcgaccctg gtcccgagcc cggcgctccg cgggagcagg agcccgcgca
301 gctcaacggc gccgcggagc cgggcgccgg gcccccgcag ctgccagagg cgctactgct
361 ccagcggcgc cgcgtgacgg tgcgcaaggc cgacgccggt gggctgggca tcagcatcaa
421 aggcggccgg gagaacaaga tgcctattct catttccaag atcttcaagg gattggcagc
481 tgaccagaca gaggcccttt ttgtggggga tgccatcctg tctgtgaatg gggaagactt
541 gtcctctgct acccatgatg aggcggtgca ggtcctcaag aagacaggca aggaggtggt
601 gctggaggtc aagtatatga aggacgtctc accgtatttc aagaactcta ctggtgggac
661 ctcggtcggc tgggactcac ctcctgcctc accccttcag cggcagcctt cctcccctgg
721 ccccacaccc cggaacttca gcgaggccaa acacatgtcc ttgaagatgg catatgtctc
781 gaagaggtgc acccccaatg acccggagcc caggtatctg gagatctgct cggcagatgg
841 tcaagacacc ctcttcctga gggccaagga tgaggctagt gcgaggtcgt gggcgactgc
901 catccaagcc caggtcaata ctctgacgcc gcgggtcaag gatgagctgc aggcactgtt
961 ggcagccacc agcacagctg ggagccagga catcaagcag attggctggc taactgagca
1021 gctgcccagt gggggcacag cccccaccct ggccctgcta actgaaaagg aactgctcct
1081 ctacttgtct ctccccgaga cccgcgaggc cctgagccgg ccagcccgta ctgccccact
1141 catcgccacc agactggtgc actcaggccc ctccaagggc tcagtgccct acgatgcaga
1201 gctctctttt gccctgcgca cgggcacgcg tcacggtgtg gacactcacc tgttcagcgt
1261 ggagtcaccg caggagctgg ctgcctggac ccgccagctt gtggatggct gtcaccgggc
1321 cgccgagggt gtgcaggagg tgtctacagc ctgcacgtgg aatgggcgtc cctgcagcct
1381 gtctgtgcac atcgacaagg gcttcacact gtgggcggct gagccaggtg cagcccgagc
1441 tgtgctcctg cgacagccct tcgagaagct gcagatgtct tcagatgacg gtgccagtct
1501 ccttttcctg gattttggag gtgctgaagg cgagatccag ctggacctgc actcgtgtcc
1561 caaaaccata gtcttcatca tccactcctt cctgtcggcc aaagtcaccc gcctcgggct
1621 gttggcctag aagtcgccgg atgcactagc cctgaagagg ggtgtccatg acatggcctg
1681 agctgggcct ccaccgactg cctgctcacc cctgggctga gggaagggag aggagaggaa
1741 caagggcctc cgaaacccca accctgaggg agactggatt ggtcttgggg cccaggaccc
1801 agacgcagga cagagtggac tctgcctgtg atggggtggc cttcctgctg cccccctcca
1861 ccagtgcctt ttgcagagag atattttgtg tacacagaag ccattccgag tctgggacct
1921 gcccctgtgc ggatcctgac cccagccaac agctgagctg ccgggcctcc tcgaggcccc
1981 taagccaccc ccagaggtcc catctgaagc tggagtaccc tggggtcagc agcaagagaa
2041 agaagaggag attttctgtt tgtttttccc ctcagccctg ccaccgtggg gagtctggtt
2101 tttctcttca tcctgtctct ctcctcctta ctcttggata aataaacagc ctgtgagcac
2161 acaggcagcc cggaaaaaaa aaaaaaaaa
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