LOCUS BC026194 3007 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens cancer antigen 1, mRNA (cDNA clone MGC:33626 IMAGE:4826784), complete cds. ACCESSION BC026194 VERSION BC026194.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3007) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3007) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC026194.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: o Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 45505176 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..3007 /db_xref="H-InvDB:HIT000040141" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33626 IMAGE:4826784" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3007 /gene="CAGE1" /gene_synonym="bA69L16.7" /db_xref="GeneID:285782" /db_xref="HGNC:HGNC:21622" /db_xref="MIM:608304" CDS 217..2319 /gene="CAGE1" /gene_synonym="bA69L16.7" /codon_start=1 /product="CAGE1 protein" /protein_id="AAH26194.1" /db_xref="GeneID:285782" /db_xref="HGNC:HGNC:21622" /db_xref="MIM:608304" /translation="MNKDYQKFWSSPSDPVHFEVDTSHEKVESMSESDTMNVSNLSQG VMLSHSPICMETTGTTCDLPQNEIKNFERENEYESTLCEDAYGTLDNLLNDNNIENYS TNALIQPVDTISISSLRQFETVCKFHWVEAFDDEMTEKPEFQSQVYNYAKDNNIKQDS FKEENPMETSVSANTDQLGNEYFRQPPPRSPPLIHCSGEMLKFTEKSLAKSIAKESAL NPSQPPSFLCKTAVPSKEIQNYGEIPEMSVSYEKEVTAEGVERPEIVSTWSSAGISWR SEACRENCEMPDWEQSAESLQPVQEDMALNEVLQKLKHTNRKQEVRIQELQCSNLYLE KRVKELQMKITKQQVFIDVINKLKENVEELIEDKYKIILEKNDTKKTLQNLEEVLANT QKHLQESRNDKEMLQLQFKKIKANYVCLQERYMTEMQQKNKSVSQYLEMDKTLSKKEE EVERLQQLKKELEKATASALDLLKREKEAQEQEFLSLQEEFQKLEKENLEERQKLKSR LEKLLTQVRNLQFMSENERTKNIKLQQQINEVKNENAKLKQQVARSEEQNYVPKFETA QLKDQLEEVLKSDITKDTKTTHSNLLPDCSPCEERLNPADIKRASQLASKMHSLLALM VGLLTCQDIINSDAEHFKESEKVSDIMLQKLKSLHLKKKTLDKELLKHKDRITTFREL IAKEKAFQDHAIKVFQGV" BASE COUNT 1137 a 517 c 618 g 735 t ORIGIN 1 gggggtcctt ggtggaggag gttggaaagc gttctccctc ccacaaaacc cggtgcagag 61 ggagggagag ccaggtccgt agcgtgggtc caagaaacta tggatcctgg aagtgagcac 121 acttttgtgt cttaaaaagt ttggtgtctc gttttgaggt gaaaaatgaa tgagataagt 181 gctttttaaa aagaagtctt ctattgttca acagttatga acaaggacta tcaaaaattt 241 tggtcatcac cttcagatcc tgtacatttt gaagtggata cttctcatga aaaagtagaa 301 agcatgtcag aatcggatac catgaatgtc agcaatcttt ctcaaggtgt aatgctttca 361 cattctccaa tctgtatgga aaccaccggc accacttgtg acttgcctca gaacgaaata 421 aagaattttg aaagggaaaa tgagtatgaa tccacacttt gtgaagatgc ttatggcaca 481 ctagacaatt tgttaaatga taacaacatt gaaaattact caacgaatgc actaattcag 541 ccagttgaca ccatcagcat atcttccttg agacaatttg aaaccgtttg caaatttcac 601 tgggtagaag catttgatga tgaaatgaca gagaagccag aatttcaaag tcaagtgtat 661 aattatgcaa aagacaacaa tataaagcaa gactcattta aggaagaaaa tccaatggaa 721 actagtgttt ctgcaaatac agaccaactt ggtaacgagt attttagaca gcctcctcct 781 agaagcccgc ctctaatcca ctgcagtgga gagatgctga aatttacaga aaagtcactg 841 gctaaaagta ttgccaagga atctgccctc aaccctagcc aacctccaag cttcttatgt 901 aagactgcag ttccttcaaa agaaatacag aattatgggg agattcctga gatgtcagtc 961 agttatgaaa aggaagtcac agcagagggt gtggagaggc cagaaattgt ctcaacttgg 1021 tcttcggcag gcatttcctg gaggagtgaa gcatgtcggg agaactgtga gatgcctgac 1081 tgggagcaaa gtgctgaaag cttacaacct gttcaagagg acatggcttt aaatgaagtc 1141 ttgcagaaat taaaacatac taacagaaag caggaagtgc gaatccaaga actccagtgt 1201 agtaacctgt atttagagaa gagggttaaa gaactacaga tgaagattac caaacagcaa 1261 gtgttcattg atgtcatcaa taagctaaag gagaatgttg aagaattaat tgaagacaaa 1321 tacaaaataa tcctagagaa gaatgatact aaaaagacat tgcagaattt ggaagaggtt 1381 ttagctaaca cgcaaaaaca tcttcaggaa tccaggaatg acaaggaaat gttacagctt 1441 caatttaaga agatcaaggc taattatgtg tgtttacagg aaaggtacat gactgaaatg 1501 caacaaaaaa ataaatctgt aagtcagtat ttagagatgg acaaaacctt aagcaagaaa 1561 gaagaagagg tagagagact acaacaactc aaaaaagaac tggaaaaggc cacagcttct 1621 gctttggact tgttgaaacg ggaaaaagag gcccaagaac aagagttctt gtctttacag 1681 gaggaattcc agaaacttga aaaggaaaac ctggaagaaa gacagaaact gaaatctaga 1741 cttgagaaat tgctcactca agttagaaat ttgcaattta tgtctgaaaa tgaaagaacg 1801 aagaatataa aacttcagca gcaaatcaac gaagtaaaaa atgagaatgc aaaacttaaa 1861 cagcaggttg caaggagtga agagcaaaat tatgtcccta aatttgagac agctcagtta 1921 aaggatcaat tagaggaagt cttgaagtca gatattacca aggatacaaa aacgacacat 1981 tctaatctgc tcccggattg ctcaccttgt gaagagaggc tgaatcctgc agatataaaa 2041 agagcttctc agctggcctc caaaatgcac agtcttctgg ctctgatggt gggacttctc 2101 acatgccagg acatcatcaa ttctgatgct gaacatttca aagagagtga gaaggttagt 2161 gatataatgc tgcaaaaact gaagagcctc catcttaaaa agaaaacttt agataaagag 2221 ctactgaaac ataaagatag aatcacaacc tttagagagt taattgctaa ggaaaaagca 2281 tttcaagatc atgctattaa ggtattccaa ggagtatgaa atgattgaaa gtgagaacaa 2341 atatatttaa tctcaggtca tagactgtga ttcagatgaa gccaagagta tcagagatgt 2401 acctaccctt ctgggagcca aactggataa gtaccacagt ctaaatgagg agcttgattt 2461 cttgatcaca aaactgggac atctcctaga gtcaaaagaa aaccactgca acagactcat 2521 tgaagaaaat gacaagtatc aaagacattt aggcaactta ataaagaagg ttacatcata 2581 tgaagaaatc attgaatgtg ctgaccaaag gcttgcaata tcccactccc agattgcaca 2641 tttggaagag agaaataaac atttagagga tttaattaga aagcccagag aaaaagccag 2701 aaaaccaaga tcaaaaagct tagaaaatca tccgaagtcc atgaccatga tgccagctct 2761 ttttaaagaa aatagaaatg atttagatta aacaagcctg aagattaaac agtaatcatt 2821 tttgtcaacc actccaggaa gagtcattac tacatatgct agccaaatca atccatgcag 2881 gtgatatatt aaaatctgta taaagggtaa agtcttacat tccaaagatg tgattacttt 2941 tcttctaatt tcttcctgtg aataatcaaa tatattctat ttaacataaa cggaaaaaaa 3001 aaaaaaa //