LOCUS BC026190 2618 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens zinc finger protein 596, mRNA (cDNA clone MGC:33349
IMAGE:4837032), complete cds.
ACCESSION BC026190
VERSION BC026190.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2618)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2618)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: d Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734918.
FEATURES Location/Qualifiers
source 1..2618
/db_xref="H-InvDB:HIT000040138"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33349 IMAGE:4837032"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2618
/gene="ZNF596"
/db_xref="GeneID:169270"
/db_xref="HGNC:HGNC:27268"
CDS 112..1626
/gene="ZNF596"
/codon_start=1
/product="zinc finger protein 596"
/protein_id="AAH26190.2"
/db_xref="GeneID:169270"
/db_xref="HGNC:HGNC:27268"
/translation="MPSPDSMTFEDIIVDFTQEEWALLDTSQRKLFQDVMLENISHLV
SIGKQLCKSVVLSQLEQVEKLSTQRISLLQGREVGIKHQEIPFIHHIYQKGTSTISTM
RSHTQEDPFLCNDLGEDFTQHIALTQNVITYMRTKHFVSKKFGKIFSDWLSFNQHKEI
HTKCKSYGSHLFDYAFIQNSALRPHSVTHTREITLECRVCGKTFSKNSNLRRHEMIHT
GEKPHGCHLCGKAFTHCSDLRKHERTHTGEKPYGCHLCGKAFSKSSNLRRHEMIHTRE
KAQICHLCGKAFTHCSDLRKHERTHLGDKPYGCLLCGKAFSKCSYLRQHERTHNGEKP
YECHLCGKAFSHCSHLRQHERSHNGEKPHGCHLCGKAFTESSVLKRHERIHTGEKPYE
CHVCGKAFTESSDLRRHERTHTGEKPYECHLCGKAFNHSSVLRRHERTHTGEKPYECN
ICGKAFNRSYNFRLHRRVHTGEKPYVCPLCGKAFSKFFNLRQHERTHTKKAMNM"
BASE COUNT 923 a 484 c 520 g 691 t
ORIGIN
1 agcgggggaa cggattctcc ggagccgagg tccgctcgga tttgtcttct tagtgcttgg
61 atggtgtgag tgaaaaccca gaggaataca tttggtggct gagctagtac aatgccatca
121 ccggattcca tgaccttcga ggatatcatt gtagacttca ctcaagaaga gtgggccctg
181 ctggacacat cccagagaaa gctgtttcaa gatgtgatgt tggagaacat cagtcatctg
241 gtctctattg gcaaacagct ctgcaaatca gttgtgcttt cccaattgga gcaagtagag
301 aaactttcaa cacaaagaat aagcttactg caaggtagag aagttggcat taaacatcaa
361 gagataccat tcattcatca tatctatcag aagggcacgt ccaccatcag cacaatgaga
421 tctcatactc aagaggatcc ttttctatgc aatgacttag gagaagattt cactcaacat
481 atagcattga ctcaaaatgt gattacctac atgagaacga aacactttgt aagcaaaaag
541 tttgggaaaa tcttcagtga ctggttatcc tttaatcaac acaaggaaat tcacaccaaa
601 tgtaaatcat atggaagtca tctatttgat tatgccttta tccaaaactc tgcccttaga
661 ccacacagtg tgactcacac tagagagata acattggaat gtcgtgtgtg tgggaaaacc
721 tttagcaaaa attctaatct taggcgacat gagatgattc acactggaga gaaaccacac
781 ggatgtcatc tatgtgggaa agcctttact cattgctctg atcttcgaaa acatgagaga
841 actcacactg gagagaagcc atatggatgt catctatgtg ggaaagcctt cagtaaaagt
901 tctaacctta gacgacatga gatgattcac actagagaaa aagcacagat atgccatcta
961 tgtgggaaag ccttcactca ttgctctgac cttagaaaac atgagagaac tcacttagga
1021 gataaaccat atggatgtct cctatgtggg aaggctttca gtaaatgttc ttaccttaga
1081 caacatgaaa gaactcacaa tggagagaaa ccatatgaat gtcatctatg tggaaaagcc
1141 ttctctcatt gttctcacct tagacaacat gagcgaagtc acaatggaga gaaaccacat
1201 ggatgtcatc tatgtgggaa agcattcact gaatcttctg tgcttaaacg acatgagaga
1261 attcacactg gagagaaacc atatgagtgc catgtatgtg ggaaagcctt cactgaatct
1321 tctgacctca gacgacatga gagaactcac actggagaaa aaccatatga atgccatcta
1381 tgcggaaaag ccttcaatca ctcttctgtc cttagacgac atgagagaac tcacactgga
1441 gagaaaccat atgaatgcaa tatatgtggt aaagccttca atagaagtta caactttaga
1501 cttcatagaa gagttcacac tggagagaaa ccatatgtat gtcctctatg tgggaaagcc
1561 tttagtaaat tttttaacct tagacaacat gagagaactc acactaaaaa agcaatgaat
1621 atgtaagaat catcagctgt agcgttaaca ctaaatacac caaggacaaa catactacag
1681 gaatattatg tctgtaatca gtgtggaaaa gcctttattt atatttacca ctttgctcaa
1741 cctaaatgaa ttcaaggtag agagaatcca gatgtattta atgtttatgg cacaaacttc
1801 agactctagg ctgaccatat acaacgtgag agaatgaaac tatagatcaa aggaatgtgg
1861 aggagtcttc atccacagct ctgttaaata aatgggagaa atcacatcac gaaaattctg
1921 tgcctgtcgt cagtgtgaaa atgcccttgc tgataattta tcctctaaac aaatgagtaa
1981 aatccacagg caagcaacca tatgtctgta attgctgtgc actctcattc agctaagcac
2041 caattttggt gtgtgcaaga aaattcatta taaggtaact gataaaaaca ggaaatatgt
2101 gaaaatattt tttattaggt ggatgaggcc tcttgaacaa ttccagacat tcatagtgga
2161 gaagttattc aatgaaaact catgagaaat ccttttctta atacagcagc acttctataa
2221 tagatcagaa ttcacatggt gtagaactct caatgacatg aatggagggt agtcctcagt
2281 aaattactca ttccttagtc aataccagta tttttccagt gagaaaacta tcttgacagg
2341 atagtggaaa aaccttcagg cagcttttat gtcaaaaaag tgagacaggg atgaaaactc
2401 taaaaagcca ttgatgagat gtatagctgg gggacaaaac ataaagccat caagcacgtg
2461 cttgagaaaa aaattataat tttgaataaa gactttctac ttaaaatatg tgggttgaaa
2521 tgtacaattc tgaaataacc tgggaatatt gaatgcagaa ttatgtaaga agtaataaga
2581 ttaaattagt actgtcaaaa ataaaaaaaa aaaaaaaa
//