LOCUS BC026185 1845 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens saccharopine dehydrogenase (putative), mRNA (cDNA
clone MGC:33173 IMAGE:4798194), complete cds.
ACCESSION BC026185
VERSION BC026185.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1845)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1845)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC026185.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55770835.
FEATURES Location/Qualifiers
source 1..1845
/db_xref="H-InvDB:HIT000040135"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33173 IMAGE:4798194"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1845
/gene="SCCPDH"
/gene_synonym="CGI-49"
/gene_synonym="RP11-439E19.2"
/db_xref="GeneID:51097"
/db_xref="HGNC:HGNC:24275"
CDS 9..1298
/gene="SCCPDH"
/gene_synonym="CGI-49"
/gene_synonym="RP11-439E19.2"
/codon_start=1
/product="saccharopine dehydrogenase (putative)"
/protein_id="AAH26185.1"
/db_xref="GeneID:51097"
/db_xref="HGNC:HGNC:24275"
/translation="MATEQRPFHLVVFGASGFTGQFVTEEVAREQVDPERSSRLPWAV
AGRSREKLQRVLEKAALKLGRPTLSSEVGIIICDIANPASLDEMAKQATVVLNCVGPY
RFYGEPVIKACIENGASCIDISGEPQFLELMQLKYHEKAADKGVYIIGSSGFDSIPAD
LGVIYTRNKMNGTLTAVESFLTIHSGHEGLSIHDGTWKSAIYGFGDQSNLRKLRNVSN
LKPVPLIGPKLKRRWPISYCRELKGYSIPFMGSDVSVVRRTQRYLYENLEESPVQYAA
YVTVGGITSVIKLMFAGLFFLFFVRFGIGRQLLIKFPWFFSFGYFSKQGPTQKQIDAA
SFTLTFFGQGYSRGTGTDKNKPNIKICTQVKGPEAGYVATPIAMVQAAMTLLSDASHL
PKAGGVFTPGAAFSKTKLIDRLNKHGIEFSVISSSEV"
BASE COUNT 506 a 369 c 441 g 529 t
ORIGIN
1 gactcgtcat ggcgaccgag cagaggcctt tccacctggt ggtgttcggc gcgtctggct
61 tcaccggcca gttcgtgacc gaggaggtgg cccgggagca ggtggacccg gagcggagct
121 cccgcctgcc ctgggccgtg gcgggccgct cccgggagaa gctgcagcgg gtgctggaga
181 aggcggccct gaagctggga agaccaacac tgtcatctga agttggaatc atcatctgtg
241 atattgctaa tccagcctcg cttgatgaaa tggctaaaca ggcaacagtt gtcctcaatt
301 gcgtaggacc atatcggttt tatggagaac ctgtaataaa agcatgtatt gaaaatggag
361 ccagttgtat cgacatcagt ggagaacctc agtttctgga actaatgcaa ctgaagtatc
421 atgagaaagc tgcagacaaa ggggtttata tcattggaag cagcggcttt gactccattc
481 cagcagatct gggagtaata tataccagaa ataaaatgaa tggtactttg actgctgtgg
541 aaagtttcct gactatacat tcaggacatg aggggttgag cattcatgat ggtacctgga
601 agtcagcaat ttatggtttt ggagatcaga gtaatttgag aaaactaaga aatgtatcaa
661 atctgaaacc tgtcccgctc attggtccaa aattgaagag aaggtggcca atttcttatt
721 gtcgggaact caaaggttat tccattcctt ttatgggatc tgatgtgtct gttgtaagga
781 ggactcaacg ttacttgtat gaaaatttag aggaatcacc agttcagtat gctgcgtatg
841 taactgtggg aggcatcacc tctgttatta agctgatgtt tgcaggactt ttctttttgt
901 tctttgtgag gtttggaatt ggaaggcaac ttctcataaa attcccatgg ttcttctcct
961 ttggctattt ttcaaaacaa ggcccaacac aaaaacagat tgatgctgcc tcattcacgc
1021 tgacattctt tggtcaagga tacagccgag gcactggtac agataagaac aaaccaaata
1081 tcaaaatttg tactcaggtg aaaggaccag aggctggcta tgtggctacc cccatagcta
1141 tggttcaggc agccatgact cttctaagtg atgcttctca tctgcctaag gcgggcgggg
1201 tcttcacacc tggagcagct ttttccaaaa caaagttgat tgacagactc aacaaacacg
1261 gtattgagtt tagtgttatt agcagctctg aagtctaaac actggaagaa ttaactgaag
1321 tcataacgtg cgtgaattaa cagcttctct atttgatatt tgaaattctt ctgtaagcct
1381 gtctgagtgt atgtggaaac gattgtcaaa tctaaaatat ctatatatta aaaagtagga
1441 aattgtccta gcttaccata aatttcaaat ctgagttgat tttgtgattt tattgcttat
1501 aacagagaac tcatatttga catatttttt tcattgatgt gttcctggta gattttcacg
1561 aatgagctgg caggtctaat gggggaggcg gcgtcccagt ctgtgttgca gcagcattct
1621 catcgggggt gcgcacacca tcgttactgt cgggcagtaa ctgccgcttg ccttgccgca
1681 gtaggaggga aatctcacct tccttccaca tactgtcttg agcctttgct aaattaaact
1741 gcactttttg ctatttttgc ctagtttttc gccaatctac actgattttg gactgttacc
1801 taagttgaaa aataaaaggt tgtcaatcga aaaaaaaaaa aaaaa
//