LOCUS BC026179 2220 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae), mRNA (cDNA
clone MGC:32910 IMAGE:4823130), complete cds.
ACCESSION BC026179
VERSION BC026179.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2220)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2220)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: k Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14589846.
FEATURES Location/Qualifiers
source 1..2220
/db_xref="H-InvDB:HIT000040130"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32910 IMAGE:4823130"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2220
/gene="SEC61A2"
/gene_synonym="FLJ10578"
/db_xref="GeneID:55176"
CDS 98..1354
/gene="SEC61A2"
/gene_synonym="FLJ10578"
/codon_start=1
/product="SEC61A2 protein"
/protein_id="AAH26179.1"
/db_xref="GeneID:55176"
/translation="MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLV
CCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV
GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGL
IVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFH
LLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQY
SSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPAR
SYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAK
QLKEQQMVMRGHRDTSMVHELNSARA"
BASE COUNT 614 a 488 c 510 g 608 t
ORIGIN
1 gcggcgtcgg gagccggtac cgaggcccga gccgcgggag tcgagcgaag gcagcgccga
61 ggccgcggtt tccccctggg cctccccagc agcagccatg ggcatcaaat ttttagaagt
121 tatcaaacca ttctgtgcag ttctaccaga aattcagaaa ccggaaagga aaatccagtt
181 tagagagaag gttctgtgga ctgctataac gctcttcatt ttcttagtgt gttgtcagat
241 cccactgttt ggaatcatgt catcagattc tgcagatcct ttctactgga tgagagttat
301 tctggcttcc aatagaggaa ctttaatgga attgggtatc tccccaattg taacatctgg
361 tttgattatg cagttgttag ctggagccaa aatcattgaa gttggagata caccgaaaga
421 tagagcttta ttcaatggag cccagaaact gtttggtatg atcattacca ttgggcaagc
481 cattgtgtat gtcatgacgg ggatgtatgg ggaccctgca gaaatgggtg ctggaatctg
541 tctcctgatc atcattcagt tgtttgttgc tggtttgatt gtgctgctgt tagatgagct
601 gctacagaag ggttacggct tggggtctgg gatttccctc tttattgcca ccaacatctg
661 tgagaccatt gtctggaagg cctttagtcc cactaccatt aacactggca gaggtactga
721 gtttgagggt gcagtcatag ctctgttcca tttgttggcc accaggacgg acaaagtccg
781 agctttacgg gaggcttttt atcggcagaa cttacccaat ctcatgaacc tcattgctac
841 agtttttgtg tttgctgttg ttatatattt ccaaggattt cgcgttgatc tgcccattaa
901 gtcggcccgt taccgaggac agtacagcag ctaccccatc aaactcttct acacctccaa
961 catccccatc atcctccagt cggccctggt gtccaacctg tatgttattt cccagatgct
1021 gtctgttcga tttagtggca actttttagt aaatttacta ggacagtggg ccgatgtcag
1081 tgggggagga cccgcacgtt cttacccagt tggaggcctt tgttactatc tttctcctcc
1141 tgagtccatg ggcgccatct ttgaggatcc tgtccatgtc gttgtttata tcatcttcat
1201 gttggggtca tgtgcattct tctctaagac atggattgaa gtgtctggtt cctcagccaa
1261 agatgtagct aaacagctga aagaacagca gatggtaatg aggggccacc gagatacctc
1321 tatggttcat gagcttaata gcgctagagc gtaggaatag accctggcgt ccactgtgag
1381 atgttcttca gctaccagag ctgtggaaag caaagaaaac aacttagatc atgccgttaa
1441 ggaaggacaa aacatcttat tcaatcagtg tttgcgcagc agaccaaaag tgaagttaag
1501 aaggtggaag ggagaaggaa gacattttac aaaaaggata ctcttctact aaaagataac
1561 cccgcacggc atttcacact tgcctacgtc accctgcttt ccacgcacct cctcagaggg
1621 aggggctgtt attgttcctg ttttatgaaa aaagccgaga gaggctacag aacctgtttg
1681 atgtgatagc taattatggt ccgcggagcc tcaaaccgag tcgggcctgt gactccgagc
1741 tgcgctgcct cgtattgatt gtcatgcctt tctccaaata cgcaccagat aaactattgt
1801 atctattcag tatgactgtt ctaactctgg ctttgagctg tcgaggtggc ttctacctta
1861 ggtctagttt ttggaaaggt gaagcaggag tggaagctct ctaagggata cgaaatctga
1921 ttttatccaa agaaatcaca gcagcctttg aaagacacat tcagattttc aaacaaacaa
1981 cagacatttc aaaaccaggc gctctgctta ttcactgaaa ccgtaagctg ctgaaactca
2041 gggaaaagct taagaaactg gtcttaaagc ttcaggccaa acaatgcttc aaatcacatt
2101 tgaagtaatc acttaaaaac agtagaaaaa tcagttatca attacctaaa acacttatac
2161 ccaataaaat attcccatga tgaaaaaaaa aaaaaaaaaa aaagaaaaaa aaaaaaaaaa
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