LOCUS BC026174 2220 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens exocyst complex component 4, mRNA (cDNA clone
IMAGE:4667989), complete cds.
ACCESSION BC026174
VERSION BC026174.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2220)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2220)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 38 Row: h Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31083366
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2220
/db_xref="H-InvDB:HIT000040127"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4667989"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_60"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2220
/gene="EXOC4"
/gene_synonym="MGC27170"
/gene_synonym="REC8"
/gene_synonym="SEC8"
/gene_synonym="Sec8p"
/db_xref="GeneID:60412"
/db_xref="HGNC:HGNC:30389"
/db_xref="IMGT/GENE-DB:30389"
/db_xref="MIM:608185"
CDS 12..1436
/gene="EXOC4"
/gene_synonym="MGC27170"
/gene_synonym="REC8"
/gene_synonym="SEC8"
/gene_synonym="Sec8p"
/codon_start=1
/product="EXOC4 protein"
/protein_id="AAH26174.1"
/db_xref="GeneID:60412"
/db_xref="HGNC:HGNC:30389"
/db_xref="IMGT/GENE-DB:30389"
/db_xref="MIM:608185"
/translation="MAAEAAGGKYRSTVSKSKDPSGLLISVIRTLSTSDDVEDRENEK
GRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENLLSCKM
LLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQVPQKLEQCMASKHYLSATDMLVSA
VESLEGPLLQVEGLSDLRLELHSKKMNLHLVLIDELHRHLYIKSTSRVVQRNKEKGKI
SSLVKDASVPLIDVTNLPTPRKFLDTSHYSTAGSSSVREINLQDIKEDLELDPEENST
LFMGILIKGLAKLKKIPETVKAIIERLEQELKQIVKRSTTQVADSGYQRGENVTVENQ
PRLLLELLELLFDKFNAVAAAHSVVLGYLQDTVVTPLTQQEDIKLYDMADVWVKIQDV
LQMLLTEYLDMKNTRTASEPSAQLSYASTGREFAAFFAKKKPQRPKNSLFKFESSSHA
ISMSAYLREQRRELYSRSGELQGE"
BASE COUNT 710 a 442 c 526 g 542 t
ORIGIN
1 gggggtccaa gatggcggca gaagcagctg gtgggaaata cagaagcaca gtcagcaaaa
61 gcaaagaccc ctcggggctg ctcatctctg tgatcaggac tctgtctact agtgacgatg
121 tcgaagacag ggaaaatgaa aagggtcgcc ttgaagaagc ctacgagaaa tgtgaccgtg
181 acctggatga attgattgta cagcactaca cagaattgac gacagccatt cgcacatacc
241 agagcatcac agagcgcatc actaactccc gaaataaaat aaagcaggta aaagagaacc
301 tgctttcatg caagatgctg ctgcactgca aacgggatga gcttcggaaa ctgtggattg
361 aaggaattga gcataagcat gtcctgaact tgttggatga aattgagaat atcaagcaag
421 tgcctcaaaa gctggaacag tgcatggcca gcaagcacta tctcagtgcc actgacatgt
481 tggtgtcagc agttgagtct ttggagggcc ccctgctcca ggtggaagga ctgagtgacc
541 ttcgactaga gcttcacagc aagaagatga accttcactt ggttctcata gatgaactac
601 accggcacct gtacatcaaa tcgactagcc gagttgtgca gcgtaacaag gaaaaaggga
661 aaatcagctc cctcgtgaaa gatgcttctg ttcctctgat tgatgttaca aacctcccta
721 ctcctcgaaa attccttgat acctctcact attctactgc tggaagctca agtgtgaggg
781 agataaatct gcaggacatc aaggaagatt tagaattgga tccagaggaa aacagcaccc
841 tgtttatggg tatcctcatt aagggcttgg cgaaactgaa gaagatccca gaaacagtta
901 aggcaatcat agagcgcttg gagcaggagt tgaagcaaat tgtgaagagg tctacaaccc
961 aggtggcaga cagtggctat cagcgggggg agaacgttac tgtggagaac caaccaaggt
1021 tgcttctaga actgctggag ttactgtttg acaagtttaa tgctgtagcc gctgcacact
1081 ctgtggtcct gggatacctg caggacactg tagtgactcc actgactcag caggaagata
1141 tcaaactgta tgatatggca gatgtatggg tgaagatcca agatgttcta cagatgctat
1201 taactgagta cttggatatg aaaaatactc gtacggcctc tgaaccatca gctcaactaa
1261 gctatgccag cactggacga gagtttgcag ccttttttgc caagaagaaa cctcaaaggc
1321 caaaaaattc tcttttcaag ttcgaatcgt cctcccatgc catcagtatg agcgcctatc
1381 tgcgagaaca gagaagggag ctctatagtc ggagtggaga actgcaaggt gagtgattga
1441 gcttctctgg aaaaattaat tttctggagg agtatttcct ttattacaca tgagtttgtg
1501 tcctgcattc acacgatcct ttcaaggtaa caaacactta gtgacttaat aatttgtttc
1561 ttctgtaatt tcccagcatc tgctgccaag caggtaaaac tattactgtg gccataggac
1621 ttgtagacct gctactgttc aagtgggaat tcaaagcaaa aagagatgag gccaggctcg
1681 tcttgcttaa acagaagacc tgagtccagt cacaatctag gagaatgttg gtcttctgcg
1741 actgccactg ttacttctaa ttgttgtttt tgacaccttc tagaatatga caggagtacc
1801 tgagatttgg gaaagggaaa atgcaaccac tgtcattatt taaagggaaa aagatgcctc
1861 taaatagtat gttataatca atataactgt gatgaacagg ctatttgata cccatgtata
1921 gttaccaaag agttgtaagc tgaagaagaa aatatttaga aaataaatta aatataaata
1981 aatatattag actgataaca tttccttctg tgacaaaaag atgctgatca tgtaaatgta
2041 atgagttaag aaaggtttgg aggtcaggtg tggtgactaa cacctgtaat ctcagcactt
2101 tgggagactg aggcaggcag atcacttgag tccaggagtt caagaccagc ctgggcgaca
2161 tggcgaagcc ctgtctctat aaaaaaaatg caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//