LOCUS BC026125 1735 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chaperonin containing TCP1, subunit 6B (zeta 2), mRNA
(cDNA clone MGC:34021 IMAGE:4822253), complete cds.
ACCESSION BC026125
VERSION BC026125.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1735)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1735)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC026125.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: j Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331172.
FEATURES Location/Qualifiers
source 1..1735
/db_xref="H-InvDB:HIT000040115"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34021 IMAGE:4822253"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1735
/gene="CCT6B"
/gene_synonym="CCT-zeta-2"
/gene_synonym="CCTZ-2"
/gene_synonym="Cctz2"
/gene_synonym="TCP-1-zeta-2"
/gene_synonym="TSA303"
/db_xref="GeneID:10693"
/db_xref="HGNC:HGNC:1621"
CDS 10..1602
/gene="CCT6B"
/gene_synonym="CCT-zeta-2"
/gene_synonym="CCTZ-2"
/gene_synonym="Cctz2"
/gene_synonym="TCP-1-zeta-2"
/gene_synonym="TSA303"
/codon_start=1
/product="chaperonin containing TCP1, subunit 6B (zeta 2)"
/protein_id="AAH26125.1"
/db_xref="GeneID:10693"
/db_xref="HGNC:HGNC:1621"
/translation="MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTM
KMLASGAGDIKLTKDGNVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGEL
LKQADLYISEGLHPRIIAEGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKV
HAELADVLTEVVVDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARH
PDMKKRVEDAFILICNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIID
LKDKVCAQSNKGFVVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVN
SFEDLTVDCLGHAGLVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIR
DGLRAIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKV
LAQNAGYDPQETLVKVQAEHVESKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSC
TVIATNILLVDEIMRAGMSSLK"
BASE COUNT 558 a 298 c 402 g 477 t
ORIGIN
1 ggttaggcta tggctgcgat aaaggccgtc aactccaagg ctgaggtggc gcgggcccag
61 gcagctttgg ctgtcaatat atgcgccgcc cgagggctgc aggatgtgct gcggaccaac
121 ttgggtccta aaggcaccat gaaaatgctt gcttctggtg caggtgacat caaactcacc
181 aaagatggca atgtactgct cgatgagatg caaattcaac atccaacagc ttccttgata
241 gcaaaagtag caacagctca ggatgacgtc acaggagatg gtactacttc aaatgttcta
301 attattggag agttattaaa acaagctgac ctgtacattt ctgagggcct gcaccctaga
361 ataatagctg aaggatttga agctgcaaag ataaaagcac ttgaagtttt ggaggaagtt
421 aaagtgacaa aggagatgaa aagaaaaatc ctcttagatg tagctagaac atcattacaa
481 actaaagttc atgctgaact ggctgatgtc ttaacagagg ttgtggtgga ttctgttttg
541 gctgttagaa gaccaggtta ccctattgat ctcttcatgg tagaaataat ggagatgaag
601 cataaattag gaacagatac aaagttgatc caaggattag ttttggatca tggtgcccgt
661 catccagata tgaagaagcg agtagaagat gcatttatcc ttatttgcaa cgtttcactg
721 gaatatgaaa aaacagaggt gaactctggt ttcttttata agactgcaga agagaaagag
781 aaattggtaa aagctgaaag aaaatttatt gaagatagag tacaaaaaat aatagacctg
841 aaggacaaag tctgtgctca gtcaaataaa ggatttgtcg tcattaatca aaagggaatt
901 gatccatttt ccttagattc tcttgcaaaa catggaatag tagctcttcg cagagcaaaa
961 agaagaaata tggaaagact ctctcttgct tgtggtggaa tggccgtgaa ttcttttgaa
1021 gatctcactg tagattgctt gggacatgct ggtcttgtgt atgagtatac attaggtgaa
1081 gaaaagttca cttttattga ggagtgtgtt aacccttgct ctgttacctt gttggttaaa
1141 ggaccaaata agcatactct cacacaagtc aaggatgcca taagagatgg acttcgtgct
1201 atcaaaaatg ccattgaaga tggttgtatg gttcctggag ctggtgcaat tgaagtggca
1261 atggctgaag ctcttgttac atataagaac agtataaaag gaagagctcg tcttggagtc
1321 caagcttttg ctgatgcctt actcattatt cccaaggttc ttgctcagaa tgctggttat
1381 gacccacagg aaacattagt aaaagttcag gctgagcatg tcgagtcaaa acaacttgtg
1441 ggcgtagatt tgaatacagg tgagccaatg gtagcagcag atgcaggagt ttgggataat
1501 tattgtgtaa aaaaacaact tcttcactct tgcacagtga ttgccaccaa cattctcctg
1561 gttgatgaaa ttatgcgagc tgggatgtct tctctcaaat gatgattgaa ttcaaaatca
1621 acccttctag aagatgaaat ttagtacact ttacatctga ctactattgt gtagcctgag
1681 ccattctgaa tttctacaca ataaatgcag tttatgtcga aaaaaaaaaa aaaaa
//