LOCUS BC026107 1522 bp mRNA linear HUM 17-NOV-2006 DEFINITION Homo sapiens KRR1, small subunit (SSU) processome component, homolog (yeast), mRNA (cDNA clone MGC:33072 IMAGE:4827704), complete cds. ACCESSION BC026107 VERSION BC026107.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1522) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1522) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC026107.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: p Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37059784. FEATURES Location/Qualifiers source 1..1522 /db_xref="H-InvDB:HIT000040110" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33072 IMAGE:4827704" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1522 /gene="KRR1" /gene_synonym="RIP-1" /db_xref="GeneID:11103" /db_xref="HGNC:HGNC:5176" CDS 25..1170 /gene="KRR1" /gene_synonym="RIP-1" /codon_start=1 /product="KRR1, small subunit (SSU) processome component, homolog (yeast)" /protein_id="AAH26107.1" /db_xref="GeneID:11103" /db_xref="HGNC:HGNC:5176" /translation="MASPSLERPEKGAGKSEFRNQKPKPENQDESELLTVPDGWKEPA FSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVC TTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKR RQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVALDTMKNIHPIYN IKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPES QIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPIVKPKE ASTETKIDVASIKEKVKKAKNKKLGALTAEEIALKMEADEKKKKKKK" BASE COUNT 551 a 242 c 324 g 405 t ORIGIN 1 ggagtcaccg gaagcagctt gcaaatggcg tctccctcgc tggagcggcc agaaaaaggc 61 gctggaaaaa gtgaatttcg taaccagaag ccgaagccgg agaaccaaga tgaatcagaa 121 ctccttacgg ttcctgatgg ttggaaggag ccagcttttt ccaaagagga caatcccaga 181 ggacttttgg aggagagcag tttcgcaact ttgttcccaa aatacaggga agcttacttg 241 aaagagtgtt ggccattggt gcagaaagcc ttaaatgaac atcatgttaa tgcaaccctg 301 gacctgatcg aaggcagcat gactgtttgt actacaaaga agacttttga tccatatatc 361 atcattaggg ccagagatct gataaaactg ttagcaagga gtgtttcatt tgaacaggca 421 gtacgaattc ttcaggatga tgttgcatgt gacatcatta aaataggttc tttagtaagg 481 aataaagaga gatttgtaaa acgaagacaa cggcttattg gtcccaaagg atctacattg 541 aaggcattgg aactcttaac taattgttac attatggttc agggaaacac agtttcagcc 601 attggacctt ttagtggctt aaaagaggtt agaaaagtag cccttgatac tatgaagaat 661 attcatccaa tttataacat taaaagctta atgattaaga gagagttggc aaaagattct 721 gaattacgat cacaaagttg ggagagattt ttgccacagt tcaaacacaa aaatgtgaat 781 aaacgcaagg aaccaaagaa aaaaactgtt aagaaagaat atacgccatt cccaccacca 841 caaccagaaa gtcagatcga taaagaattg gctagtggtg aatacttttt gaaggcaaat 901 cagaagaagc ggcagaaaat ggaagcaata aaggctaaac aagcagaagc catcagtaag 961 agacaagagg aaagaaacaa agcatttatt ccacctaagg aaaaaccaat tgtgaaacct 1021 aaggaagctt ctactgaaac taaaattgat gtggccagca tcaaggaaaa ggttaagaaa 1081 gcaaagaata agaaactggg agctcttaca gctgaagaaa ttgcacttaa gatggaggca 1141 gatgaaaaga aaaagaagaa aaaaaagtaa catacccaaa actccttgac tagaactatc 1201 tccttttgta aaggattttg agatatcagg cattagttgc cttatttgtg agaaattttc 1261 tgagggcttt tttttttttt ggtggtggtg gttgttcata gaagagtgtt ctttataaat 1321 tatattatta ttgtattttt tgaaaaattt atactagaaa gtggtatata tatctttgta 1381 tacattacga ccattgtgat tatccattaa atccagtgtc tgatgctatt ggttagtaat 1441 gatgtcccag catttgatgt tccctctcta atgataacaa gtaaatattt aggtttatcc 1501 cttttgaaaa aaaaaaaaaa aa //