LOCUS BC026102 1544 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens period homolog 3 (Drosophila), mRNA (cDNA clone
IMAGE:4818811), complete cds.
ACCESSION BC026102
VERSION BC026102.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1544)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1544)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: g Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8567387
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1544
/db_xref="H-InvDB:HIT000040107"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4818811"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1544
/gene="PER3"
/gene_synonym="GIG13"
/db_xref="GeneID:8863"
/db_xref="MIM:603427"
CDS 287..1423
/gene="PER3"
/gene_synonym="GIG13"
/codon_start=1
/product="PER3 protein"
/protein_id="AAH26102.1"
/db_xref="GeneID:8863"
/db_xref="MIM:603427"
/translation="MPRGEAPGPGRRGAKDEALGEESGERWSPEFHLQRKLADSSHSE
QQDRNRVSEELIMVVQEMKKYFPSERRNKPSTLDALNYALRCVHSVQANSEFFQILSQ
NGAPQADVSMYSLEELATIASEHTSKNTDTFVAVFSFLSGRLVHISEQAALILNRKKD
VLASSHFVDLLAPQDMRVFYAHTARAQLPFWNNWTQRAARYECAPVKPFFCRIRGGED
RKQEKCHSPFRIIPYLIHVHHPAQPELESEPCCLTVVEKIHSGYEAPRIPVNKRIFTT
THTPGCVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPP
FEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKISFIIGRHKVRT"
BASE COUNT 404 a 388 c 395 g 357 t
ORIGIN
1 agcgggcgtg ggcggccccg ggggcgagcg gctgtgcgcg gggccaaggg cgggggcagc
61 aggccggagt catgaaagtc gagcgagctc cgggttttga aaatgttgga gggaaaagct
121 cctcggagat gagcgtgacc ccctggctcg tggtggccgc ctgttctcac taacgccatg
181 gcggggaccg gagtgagaaa ccggtgtctg tcactgactg caaagtgagc gagaagcagg
241 ctgcgggccg tcccagcacg acgtggagcc ccgcggagac ctcgagatgc cccgcgggga
301 agctcctggc cccgggagac ggggggctaa ggacgaggcc ctgggcgaag aatcggggga
361 gcggtggagc cccgagttcc atctgcagag gaaattggcg gacagcagcc acagtgaaca
421 gcaagatcga aacagagttt ctgaagaact tatcatggtt gtccaagaaa tgaaaaaata
481 cttcccctcg gagagacgca ataaaccaag cactctagat gccctcaact atgctctccg
541 ctgtgtccac agcgttcaag caaacagtga gtttttccag attctcagtc agaatggagc
601 acctcaggca gatgtgagca tgtacagtct tgaggagctg gccactatcg cttcagaaca
661 cacttccaaa aacacagata cctttgtggc agtattttca tttctgtctg gaaggttagt
721 gcacatttct gaacaggctg ctttgatcct gaatcgtaag aaagatgtcc tggcgtcttc
781 tcactttgtt gacctgcttg cacctcaaga catgagggta ttctacgcgc acactgccag
841 agctcagctt cctttctgga acaactggac ccaaagagct gcacggtatg aatgtgctcc
901 ggtgaaacct tttttctgca ggatccgtgg aggtgaagac agaaagcaag agaagtgtca
961 ctccccattc cggatcatcc cctatctgat tcatgtacat caccctgccc agccagaatt
1021 ggaatcggaa ccttgctgtc tcactgtggt tgaaaagatt cactctggtt atgaagctcc
1081 tcggatccca gtgaataaaa gaatcttcac caccacacac accccagggt gtgtttttct
1141 tgaagtagat gaaaaagcag tgcctttgct gggttaccta cctcaggacc tgattggaac
1201 atcgatccta agctacctgc accctgaaga tcgttctctg atggttgcca tacaccaaaa
1261 agttttgaag tatgcagggc atcctccctt tgaacattct cccattcgat tttgtactca
1321 aaacggagac tacatcatac tggattccag ttggtccagc tttgtgaatc cctggagccg
1381 gaagatttct ttcatcattg gtcggcataa agttcgaacg taagccagtc agttttcata
1441 ttttctaaaa catctcttgt atcaaataat attccttagc ttattgactg ccctctgact
1501 caattgacac ataaactaaa taaagcacaa aaaaaaaaaa aaaa
//