LOCUS BC026067 1980 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens WD repeats and SOF1 domain containing, mRNA (cDNA
clone IMAGE:4838415), partial cds.
ACCESSION BC026067
VERSION BC026067.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1980)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1980)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: o Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542525.
FEATURES Location/Qualifiers
source 1..1980
/db_xref="H-InvDB:HIT000040087"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4838415"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1980
/gene="WDSOF1"
/gene_synonym="DKFZP564O0463"
/gene_synonym="Gm83"
/gene_synonym="HSPC064"
/db_xref="GeneID:25879"
CDS <1..1396
/gene="WDSOF1"
/gene_synonym="DKFZP564O0463"
/gene_synonym="Gm83"
/gene_synonym="HSPC064"
/codon_start=2
/product="WDSOF1 protein"
/protein_id="AAH26067.2"
/db_xref="GeneID:25879"
/translation="AGAELLADTSWSPAGRATEMKVKMLSRNPDNYVRETKLDLQRVP
RNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLATVL
SGSCDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQWKMDGP
GYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDEQRTNPICSMTWGFDSI
SSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAA
NEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSR
SREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREKAAKDY
NQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPGSVP
LVSEKKKHVVAVVK"
BASE COUNT 626 a 335 c 405 g 614 t
ORIGIN
1 agcgggggcg gaactcctag cggacacctc gtggagtccg gccggaagag caaccgagat
61 gaaggtgaag atgctgagcc ggaatccgga caattatgtc cgcgaaacca agttggactt
121 acagagagtt ccaagaaact atgatcctgc tttacatcct tttgaggtcc cacgagaata
181 tataagagct ttaaatgcta ccaaactgga acgagtattt gcaaaaccat tccttgcttc
241 gctggatggt caccgtgatg gagtcaattg cttggcaaag catccagaga agctggctac
301 tgtcctttct gggtcgtgtg atggagaggt tagaatttgg aatctaactc agcggaattg
361 tatccgtaca atacaagcac atgaaggctt tgtacgagga atatgtactc gcttttgtgg
421 gacttctttt ttcactgttg gtgatgacaa aactgtgaag cagtggaaaa tggatgggcc
481 aggctatgga gacgaggaag agccattaca tacaatatta ggaaagacag tgtatactgg
541 gattgatcat cactggaaag aagctgtttt tgccacatgt ggacagcaag tagacatttg
601 ggatgaacaa agaactaatc ctatatgttc aatgacctgg ggatttgaca gtataagtag
661 tgttaaattt aacccaattg agacatttct cttgggaagt tgtgcatctg acaggaatat
721 agtactgtac gatatgaggc aagctactcc tttgaaaaag gttatcttag atatgagaac
781 aaatacaatc tgttggaacc ctatggaagc tttcattttt acagcagcaa atgaagatta
841 taacttatat acttttgata tgcgtgcact ggacactcct gtaatggtcc atatggatca
901 tgtatctgca gtgcttgatg tggattactc tcccactggg aaggagtttg tgtctgctag
961 tttcgataaa tctattcgaa tctttcctgt agacaaaagt cgaagcaggg aggtatatca
1021 tacaaagaga atgcaacatg ttatctgtgt aaaatggact tctgacagca agtatattat
1081 gtgtggatct gatgaaatga acattcgcct gtggaaagct aatgcttctg aaaaattggg
1141 tgtgcttaca tcacgagaaa aagcagccaa ggattataac cagaaattga aggagaaatt
1201 tcagcattat cctcatataa aacgtatagc tcgtcatcga catctaccaa aatctatcta
1261 tagccagatt caggaacagc gcatcatgaa agaagctcgt cgacgaaagg aagtgaatcg
1321 tattaaacac agcaagcctg gatctgtgcc acttgtgtca gagaagaaga aacacgtagt
1381 ggcagttgta aaataattgg tattcctaac aatcctgatg tataattatt tgttactttt
1441 gatttgagaa ctctacaaat aaaagtgctg ggactagatt aattgcaaac attttagtta
1501 tatgtgtaga gctttattgt tactcctttt agctaccctg aaaaatgatc cttaaaggtg
1561 gcctagttgg taagactgtt ttatccttaa tctgcattct tctttcattg tagaatacag
1621 tatttgcaac tcattttttc ttgtttttat tacagatata cttactttct ctttgatcta
1681 ttattgtaga cactatacat tcaaattgac atttaagacc aaacatctct tatgttatct
1741 ttaatattac tttgaataat gattgcaatg atgtttcttc ctgtgattcc acataacatt
1801 tagaataatg atgtcaattt tttacaactg aatttatttc tagtgcttta cttatatttg
1861 gctttttgac tcttttaaaa caatcagcct gcatttatat aacttttata aataataata
1921 taatttgggt caagttaaga tattaaaagt tcctttcagc atcgaaaaaa aaaaaaaaaa
//