LOCUS BC026030 2031 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens zinc finger protein 239, mRNA (cDNA clone MGC:39220
IMAGE:5460088), complete cds.
ACCESSION BC026030
VERSION BC026030.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2031)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2031)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5032244.
FEATURES Location/Qualifiers
source 1..2031
/db_xref="H-InvDB:HIT000040073"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39220 IMAGE:5460088"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2031
/gene="ZNF239"
/gene_synonym="HOK-2"
/gene_synonym="MOK2"
/db_xref="GeneID:8187"
/db_xref="MIM:601069"
CDS 279..1655
/gene="ZNF239"
/gene_synonym="HOK-2"
/gene_synonym="MOK2"
/codon_start=1
/product="ZNF239 protein"
/protein_id="AAH26030.1"
/db_xref="GeneID:8187"
/db_xref="MIM:601069"
/translation="MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNR
DSVMTLQSGCFENIESETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEEST
ERKVIKGESCSENLQVKLVSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGW
KSQVVSCSQQRAHTEEKPCDHNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQ
SSELLLHQRDHTEEKPYKCEQCGKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSS
SLLIHHAVHTGEKPYKCDKCGKGFSQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNL
HIHQRVHTGERPYKCGECGKGFSQSSNLHIHRCIHTGEKPYQCYECGKGFSQSSDLRI
HLRVHTGEKPYHCGKCGKGFSQSSKLLIHQRVHTGEKPYECSKCGKGFSQSSNLHIHQ
RVHKKDPR"
misc_feature 855..1457
/gene="ZNF239"
/gene_synonym="HOK-2"
/gene_synonym="MOK2"
/note="COG5048; Region: COG5048, FOG: Zn-finger [General
function prediction only]"
/db_xref="CDD:COG5048"
BASE COUNT 621 a 429 c 491 g 490 t
ORIGIN
1 ggcgtggggt tccacgtggg aggaatccat cccctctggg agtaagaaat gaccagggtc
61 cgggaaccag ttacattcaa ggatgcctct gtggccttca ccgaggagga gtgaggtcac
121 ctggactctg ctcccaggaa gctgtgcgga gctgtgatgc tgggcaacta cagaaacttg
181 gtcttggaga cttgaatgaa aattctgtgg agaatcttca gcagaaaaca cttcaggatc
241 tgttacatga gctttcctcc tggctagttt tggaaggcat ggccagtaca attactggaa
301 gtcaggattg tattgtgaat catcgagggg aagtggatgg ggagcctgaa ctagatattt
361 ccccttgtca acagtgggga gaagcatctt ctcctatttc cagaaacagg gacagtgtga
421 tgactcttca aagtggttgt ttcgaaaaca ttgaaagtga aacatatttg cctttgaaag
481 tctcaagcca aatagacaca caagactctt cagtgaagtt ctgtaagaat gagcctcagg
541 atcatcagga aagcagacgt ctctttgtaa tggaagaaag cactgagaga aaagtgataa
601 agggggaaag ttgttcagag aaccttcaag ttaaactggt gtctgatgga caagaactgg
661 cctcgccatt gttaaatggt gaggcaactt gccagaatgg ccagttaaaa gaatctttgg
721 atcccattga ctgtaactgc aaagacattc atggatggaa atcacaggtg gtcagttgta
781 gtcagcagag agctcataca gaggagaaac cctgtgacca taataactgt gggaaaatac
841 ttaacaccag cccagatggt catccatatg agaaaatcca cactgcagag aaacaatacg
901 aatgtagtca gtgtggtaag aacttcagtc aaagctcaga gctactactt catcagagag
961 accacacaga agaaaaaccc tacaaatgtg agcaatgtgg gaagggcttc acaaggagct
1021 cgagtctgct tatccatcag gcagtccaca cagatgagaa gccttataag tgtgacaagt
1081 gtgggaaggg cttcaccagg agctcaagtc tgctcatcca tcatgccgtc catacaggcg
1141 aaaaacctta taaatgtgac aagtgtggga agggctttag tcagagctcc aaactgcaca
1201 tccaccagcg agtccacact ggagagaagc cctatgagtg tgaggagtgt ggtatgagct
1261 tcagtcagcg ctcaaacctg cacatccacc agcgagtaca cacaggagag aggccctaca
1321 agtgtggtga gtgtgggaag ggcttcagtc agagctcgaa ccttcacatt caccggtgca
1381 tccacacagg agagaagcct taccaatgct atgagtgtgg gaagggtttc agccagagct
1441 cggatcttcg catccatctc agagtccaca ctggagagaa gccctatcac tgtggcaagt
1501 gtgggaaggg atttagccag agttccaaac tcctcatcca ccagagagta catactggag
1561 agaagcccta tgagtgcagc aagtgtggga agggcttcag ccagagctcc aaccttcaca
1621 tccaccagcg ggttcacaag aaagatcctc gctaactgac attagcccat tcaggtcttc
1681 acagcgctca tactgtaaaa actgttaaat atttagtatc actcttactt tatattctac
1741 aaaggagaga gatgtaaggg ttatttagat atgttccctc actgaaaaat cactcattca
1801 aaatatttaa gtatcaagca ctttgttatg ctgtacaatg aatggattgt tcttgtttct
1861 cagatgggta gagtaaaagt gtctgtactt tacaattcaa ctacatgttc tacccagcat
1921 tttaacggca agaactttat atttattctc aagcagggca tgtttccctt tgttcacatt
1981 ctctgataaa ttgaaactct ggtttctctt caaaaaaaaa aaaaaaaaaa a
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