LOCUS BC026028 1966 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens nuclear receptor co-repressor 1, mRNA (cDNA clone
IMAGE:3836580), partial cds.
ACCESSION BC026028
VERSION BC026028.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1966)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1966)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538460.
FEATURES Location/Qualifiers
source 1..1966
/db_xref="H-InvDB:HIT000091161"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3836580"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1966
/gene="NCOR1"
/gene_synonym="hCIT529I10"
/gene_synonym="hN-CoR"
/gene_synonym="N-CoR"
/gene_synonym="TRAC1"
/db_xref="GeneID:9611"
/db_xref="HGNC:HGNC:7672"
/db_xref="MIM:600849"
CDS 344..>1966
/gene="NCOR1"
/gene_synonym="hCIT529I10"
/gene_synonym="hN-CoR"
/gene_synonym="N-CoR"
/gene_synonym="TRAC1"
/codon_start=1
/product="NCOR1 protein"
/protein_id="AAH26028.1"
/db_xref="GeneID:9611"
/db_xref="HGNC:HGNC:7672"
/db_xref="MIM:600849"
/translation="MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPNTRHQQEFAVPDYR
SSHLEVSQASQLLQQQQQQQLRRRPSLLSEFHPGSDRPQERRTSYEPFHPGPSPVDHD
SLESKRPRLEQVSDSHFQRVSAAVLPLVHPLPEGLRASADAKKDPAFGGKHEAPSSPI
SGQPCGDDQNASPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPE
PEKPVSPPPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYH
ENIKTGVPARRMMKNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRI
ENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIARSEHEISEI
IDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFINMNGLMEDPMKVYKDRQFMNVWT
DHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRNYGKRR
GRNQQIARPSQEEKVEEKEEDKAEKTEKKKKKK"
BASE COUNT 625 a 434 c 474 g 433 t
ORIGIN
1 ggtggcgaag cagcagccgc ggcggcggcg gcggctggag tgagcgtccg actcgccgcg
61 ccgaacgagg tcccggtgta gggccgcgcg ccgtggccgc gtcccactcc tcaggccggg
121 gcgcacgtcg gctcccacgc ttagccagct cccgagtttc actcttgttg cccaggctgg
181 agtgcaatgg cacgatctcg gctcaccgca acctctgcct cttgggttca agcgattctc
241 ctgcctcagc ctctcgagta gctgggatta caggtggttt cctagaaaca tgattgttta
301 ttggcattga tctcacagtc tggtgaggac ttctttactg ataatgtcaa gttcaggtta
361 tcctcccaac caaggagcat tcagcacaga acaaagtcgt tatcctcctc actctgtcca
421 gtatacattt cccaacaccc gccaccagca ggagttcgca gtccctgatt atcgttcctc
481 tcatcttgaa gtgagtcagg catcacagct tttgcagcaa cagcagcagc aacagcttcg
541 aaggcgacct tccttgcttt cagaatttca cccaggttct gacaggcctc aagaaaggag
601 aactagttat gaaccgtttc atccaggccc atccccagtg gatcatgatt cactggaatc
661 gaagcgacca cgtctggaac aggtttctga ttctcatttt cagcgtgtca gtgctgcggt
721 tttgccttta gtgcacccgc tgccagaagg gctgagggct tctgcagatg ctaagaagga
781 tccagcattc ggaggcaaac atgaagctcc atcctctcca atttcggggc aaccatgtgg
841 agatgatcaa aatgcttcac cttcaaaact ctcaaaggaa gagttaatac agagtatgga
901 tcgtgtagat cgagaaattg caaaagtaga acagcagatc cttaaactga aaaagaaaca
961 acaacagctt gaagaagagg cagctaaacc tcctgagcct gagaagcccg tgtcccctcc
1021 tcctgtggag cagaaacacc gcagtattgt ccaaattatt tatgatgaga atcggaaaaa
1081 agcagaagaa gctcataaaa tttttgaagg tcttggccca aaagttgaac tgccactgta
1141 taaccagcca tcagatacca aggtgtacca tgagaacatc aagactggag tacctgcaag
1201 gcgcatgatg aaaaaccagg tgatgaggaa aaaactcatt ttatttttta aaagaagaaa
1261 tcatgcaaga aaacaaaggg aacaaaaaat ctgccagcgt tatgatcagc tcatggaggc
1321 atgggagaaa aaagtggaca gaatagaaaa taatcctcgg aggaaagcta aagaaagcaa
1381 aacaagggaa tactatgaaa agcagtttcc agaaattcga aaacaaagag aacagcaaga
1441 aagatttcag cgagttgggc agaggggagc tggtctttca gccaccattg ctaggagtga
1501 gcatgagatt tctgaaatta ttgatgggct ctctgagcag gagaataatg agaaacaaat
1561 gcggcagctc tctgtgattc cacctatgat gtttgatgca gaacaaagac gagtcaagtt
1621 cattaacatg aatgggctta tggaggaccc tatgaaagtg tataaagata ggcagtttat
1681 gaatgtttgg actgaccatg aaaaggagat ctttaaggac aagtttatcc agcatccaaa
1741 aaactttgga ctaattgcat catacttgga gaggaagagt gttcctgatt gtgttttgta
1801 ttactattta accaagaaaa atgagaatta taaagccctc gtcagaagga attatgggaa
1861 acgcagaggc agaaaccagc aaattgctcg accctcgcaa gaagaaaaag tagaagaaaa
1921 agaagaggat aaagcagaaa aaacagaaaa aaaaaaaaaa aaaaaa
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